RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BSCL2Q96G97 398 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RHNO1Q9BSD3 238 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM43Q9BTV4 400 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CHODLQ9H9P2 273 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SNTG1Q9NSN8 517 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OXSMQ9NWU1 459 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DNAJC27Q9NZQ0 273 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 KIAA1456Q9P272 454 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 INTS6Q9UL03 887 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HIF3AQ9Y2N7 669 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 A0A0B4J293 547 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TSPAN11A1L157 253 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 EME2A4GXA9 379 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD65E5RJM6 399 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SLC43A1O75387 559 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CLN5O75503 358 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PDE5AO76074 875 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 YIF1AO95070 293 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PAPLNO95428 1278 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CRYZL1O95825 349 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MT-CO2P00403 227 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 H1F0P07305 194 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IL2RGP31785 369 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PCGF2P35227 344 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RBM34P42696 430 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SLC6A8P48029 635 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DCAF7P61962 342 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TLE4Q04727 773 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PTP4A2Q12974 167 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 C18orf21Q32NC0 220 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SCGB2B2Q4G0G5 96 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TPRG1LQ5T0D9 272 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 AGAP6Q5VW22 663 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 LIPNQ5VXI9 398 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RAD9BQ6WBX8 426 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF704Q6ZNC4 412 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OVCH1Q7RTY7 1134 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PIWIL3Q7Z3Z3 882 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CMTM4Q8IZR5 234 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC18Q8N456 261 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PQLC3Q8N755 202 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FDCSPQ8NFU4 85 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR52B6Q8NGF0 335 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 STOML3Q8TAV4 291 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF473Q8WTR7 871 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CNOT9Q92600 299 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FKBP10Q96AY3 582 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CCDC120Q96HB5 630 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HRASLS5Q96KN8 279 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZFP3Q96NJ6 502 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SCPEP1Q9HB40 452 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ACTR3BQ9P1U1 418 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MYOTQ9UBF9 498 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CLIC1O00299 241 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GALR3O60755 368 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF728P0DKX0 622 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CAPN3P20807 821 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IGFBP5P24593 272 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SSTR2P30874 369 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SDC2P34741 201 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 BMI1P35226 326 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OPRM1P35372 400 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GDF5P43026 501 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEA3P43357 314 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CDKN2DP55273 166 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 XIAPP98170 497 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PMP22Q01453 160 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SLC3A1Q07837 685 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FGL1Q08830 312 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 EXOSC7Q15024 291 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FAM205BPQ63HN1 556 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RAB12Q6IQ22 244 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FIGNL1Q6PIW4 674 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF600Q6ZNG1 722 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNT8Q7Z7M8 397 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MRGPREQ86SM8 312 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NLRP8Q86W28 1048 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF843Q8N446 348 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MREGQ8N565 214 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OSTF1Q92882 214 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 BORCS5Q969J3 196 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MCHR1Q99705 422 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PECRQ9BY49 303 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ULBP2Q9BZM5 246 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PITHD1Q9GZP4 211 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR10A5Q9H207 317 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SEMA6AQ9H2E6 1030 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZMAT3Q9HA38 289 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 KLHL9Q9P2J3 617 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ONECUT1Q9UBC0 465 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CBLCQ9ULV8 474 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 COA3Q9Y2R0 106 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PCDHGA7Q9Y5G6 932 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 COMMD3-BMI1R4GMX3 469 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR14I1A6ND48 311 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF732B4DXR9 585 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ARL6IP5O75915 188 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TGM6O95932 706 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NDUFB7P17568 137 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms