RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 CACNA1CQ13936 2221 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 SPTBN1Q01082 2364 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 IGKV3D-15A0A087WSY6 115 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 EFCAB9A8MZ26 197 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 MS4A18H0YCH9 400 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 PLPP3O14495 311 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 CDC42EP2O14613 210 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 KLF4O43474 513 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 OR10H3O60404 316 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 SS18L1O75177 396 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 TMIGD3P0DMS9 266 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 DNAJA1P31689 397 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 SLC16A1P53985 500 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 PER3P56645 1201 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 FOXF2Q12947 444 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 SLC17A1Q14916 467 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 PDK3Q15120 406 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 MICAQ29983 383 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 MS4A18Q3C1V0 323 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GTF2IRD2BQ6EKJ0 949 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 PGBD2Q6P3X8 592 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 AMIGO2Q86SJ2 522 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GTF2IRD2Q86UP8 949 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 MCEMP1Q8IX19 187 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 LINC00471Q8N535 108 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 OR9Q2Q8NGE9 314 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 INTS12Q96CB8 462 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GMPPAQ96IJ6 420 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GPA33Q99795 319 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 BCO1Q9HAY6 547 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GP6Q9HCN6 339 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 KRCC1Q9NPI7 259 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 GLRX2Q9NS18 164 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 KLHL9Q9P2J3 617 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 B3GAT1Q9P2W7 334 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 CLEC4AQ9UMR7 237 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 RASD1Q9Y272 281 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 TENM4Q6N022 2769 aa11.99□□□□□ -0.49
UBE2D3-221ENST00000507845 A0A1W2PNV4 684 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HSPB2A8KAH6 182 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 E2F6O75461 281 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 VAMP5O95183 116 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HPRP00739 348 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HIST1H2ABP04908 130 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 CRHP06850 196 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 TSPAN19P0C672 248 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 SAGP10523 405 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 UQCRC1P31930 480 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 IFNGR2P38484 337 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 GSSP48637 474 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 SLC9A3P48764 834 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 ZP4Q12836 540 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 FHL1Q13642 323 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 POU4F3Q15319 338 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HSPB2Q16082 182 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 C1orf94Q6P1W5 598 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 SHQ1Q6PI26 577 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HIST3H2AQ7L7L0 130 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 NANOGNBQ7Z5D8 188 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 CCDC71Q8IV32 467 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 TUSC5Q8IXB3 177 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 KDM8Q8N371 416 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 OR10G2Q8NGC3 310 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 OR9K2Q8NGE7 335 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 OR13C2Q8NGS9 318 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 GIPC3Q8TF64 312 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 STMN2Q93045 179 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 HIST1H2ACQ93077 130 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 OXGR1Q96P68 337 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 PKP2Q99959 881 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 BDH2Q9BUT1 245 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 SF3B5Q9BWJ5 86 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 TAS2R5Q9NYW4 299 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 RNF6Q9Y252 685 aa11.98□□□□□ -0.49
UBE2D3-221ENST00000507845 TRAV27A0A087WT01 109 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 ARRDC5A6NEK1 342 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 ZNF724A8MTY0 619 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 TNFSF13O75888 250 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 PLGP00747 810 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 YES1P07947 543 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 ADORA3P0DMS8 318 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 FPR3P25089 353 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 CTSSP25774 331 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 AGTR1P30556 359 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 KIR2DL2P43627 348 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 RPS4XP62701 263 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 SIRPAP78324 504 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 PUDPQ08623 228 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 NHLRC1Q6VVB1 395 aa11.97□□□□□ -0.49
UBE2D3-221ENST00000507845 FAM214BQ7L5A3 538 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms