RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FAM151AQ8WW52 585 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 RDH5Q92781 318 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 FGF14Q92915 247 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 TM4SF19Q96DZ7 209 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 SLC35E1Q96K37 410 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 TCEANC2Q96MN5 208 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ZNF641Q96N77 438 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 PPA2Q9H2U2 334 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 NIPAL2Q9H841 368 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 METTL7AQ9H8H3 244 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 LY9Q9HBG7 655 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 MMP26Q9NRE1 261 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 GIN1Q9NXP7 522 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 BFARQ9NZS9 450 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 CLCF1Q9UBD9 225 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 TMCO1Q9UM00 188 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 PRG3Q9Y2Y8 225 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 PCP4L1A6NKN8 68 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 AGPAT2O15120 278 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 TNFSF13O75888 250 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 OR7A10O76100 309 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 C1orf105O95561 183 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 P04436 131 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 RCC1P18754 421 aaPredicted RBP2.29□□□□□ -2.04
LSM6-205ENST00000507449 CD1CP29017 333 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 PBLDP30039 288 aaPredicted RBP2.29□□□□□ -2.04
LSM6-205ENST00000507449 TPMTP51580 245 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 TIMM10P62072 90 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 RPL23AP62750 156 aaKnown RBP2.29□□□□□ -2.04
LSM6-205ENST00000507449 ACVR1Q04771 509 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 SCRN3Q0VDG4 424 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 UNC119Q13432 240 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 ARFRP1Q13795 201 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 NRF1Q16656 503 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 RABL6Q3YEC7 729 aaPredicted RBP2.29□□□□□ -2.04
LSM6-205ENST00000507449 MARCH8Q5T0T0 291 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 Q6ZN92 141 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 ZNF620Q6ZNG0 422 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 OR6C4Q8NGE1 309 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 UCN3Q969E3 161 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 FBXO32Q969P5 355 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 ELSPBP1Q96BH3 223 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 TUBGCP3Q96CW5 907 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 FCRL1Q96LA6 429 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 MS4A4EQ96PG1 132 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 MBOAT4Q96T53 435 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 CNN2Q99439 309 aaKnown RBP2.29□□□□□ -2.04
LSM6-205ENST00000507449 TMEM246Q9BRR3 403 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 DEFB127Q9H1M4 99 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 RPS6KB2Q9UBS0 482 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 SLC7A8Q9UHI5 535 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 MMP17Q9ULZ9 603 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 HPCAL4Q9UM19 191 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 NEU3Q9UQ49 428 aa2.29□□□□□ -2.04
LSM6-205ENST00000507449 FAM240BA0A1B0GVZ2 78 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 GJE1A6NN92 205 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 C12orf77C9JDV5 145 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 PALMO75781 387 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 SNX4O95219 450 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 INSP01308 110 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 MMP1P03956 469 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 CT62P0C5K7 136 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 ICAM2P13598 275 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 MX1P20591 662 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 GLP1RP43220 463 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 ARRB1P49407 418 aaPredicted RBP2.28□□□□□ -2.04
LSM6-205ENST00000507449 CDH4P55283 916 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 REG3AQ06141 175 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 GPR157Q5UAW9 335 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 PAQR7Q86WK9 346 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 EGFL6Q8IUX8 553 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 PSTKQ8IV42 348 aaKnown RBP2.28□□□□□ -2.04
LSM6-205ENST00000507449 NUDCD3Q8IVD9 361 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 TMEM61Q8N0U2 210 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 LINC01555Q8NAE3 123 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 OR2L3Q8NG85 312 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 FANK1Q8TC84 345 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 RNF138Q8WVD3 245 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 ACOT11Q8WXI4 607 aaPredicted RBP2.28□□□□□ -2.04
LSM6-205ENST00000507449 LRRC58Q96CX6 371 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 PLEKHA8Q96JA3 519 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 RASL11BQ9BPW5 248 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 NRIP2Q9BQI9 281 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 CHRDL1Q9BU40 450 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 OR11A1Q9GZK7 315 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 SRMSQ9H3Y6 488 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 SUN2Q9UH99 717 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 TP53TG5Q9Y2B4 290 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 PEX16Q9Y5Y5 336 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 NPTNQ9Y639 398 aa2.28□□□□□ -2.04
LSM6-205ENST00000507449 IGKV6D-41A0A0C4DH26 115 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 A0A0U1RQS6 177 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 H0Y9J4 135 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 TOM1O60784 492 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 UBTFL1P0CB47 393 aaPredicted RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 TBPP20226 339 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 PRDX3P30048 256 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms