RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 BTBD10Q9BSF8 475 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 FNDC11Q9BVV2 318 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 C20orf141Q9NUB4 165 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 MRPL39Q9NYK5 338 aaKnown RBP16.09■□□□□ 0.17
NPHP4-210ENST00000506941 CRIM1Q9NZV1 1036 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 B3GALT5Q9Y2C3 310 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 CORINQ9Y5Q5 1042 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 TCRBV5S2A0A599 114 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 ENO4A6NNW6 628 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 DIRAS1O95057 198 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 MT-ATP6P00846 226 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 IGHV3-9P01782 118 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 MT-ND1P03886 318 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 KIR2DL3P43628 341 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 DNAL1Q4LDG9 190 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 LCN8Q6JVE9 175 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 CASP12Q6UXS9 341 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 CXorf67Q86X51 503 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF100Q8IYN0 542 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 ASPNQ9BXN1 380 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 KLHL4Q9C0H6 718 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 FKRPQ9H9S5 495 aa16.08■□□□□ 0.16
NPHP4-210ENST00000506941 TUBAL3A6NHL2 446 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 PLPP3O14495 311 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 MRPL33O75394 65 aaKnown RBP16.07■□□□□ 0.16
NPHP4-210ENST00000506941 HLA-DOBP13765 273 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 NQO1P15559 274 aaKnown RBP16.07■□□□□ 0.16
NPHP4-210ENST00000506941 PMS2P3Q13401 168 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 TRAM2Q15035 370 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 PGM2L1Q6PCE3 622 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 Q6ZT83 130 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 C22orf34Q6ZV56 151 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 DHFR2Q86XF0 187 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 PIK3C3Q8NEB9 887 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 OR5J2Q8NH18 312 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 APH1AQ96BI3 265 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 ASB9Q96DX5 294 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 HS6ST2Q96MM7 605 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 OXGR1Q96P68 337 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 NMNAT1Q9HAN9 279 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-210ENST00000506941 NANSQ9NR45 359 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 KCNN3Q9UGI6 736 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF229Q9UJW7 825 aa16.07■□□□□ 0.16
NPHP4-210ENST00000506941 ABCA4P78363 2273 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 LOC102725191A0A1B0GVB3 256 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 C16orf97H3BN30 126 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 ACOT8O14734 319 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 TRAF3IP2O43734 574 aaPredicted RBP16.06■□□□□ 0.16
NPHP4-210ENST00000506941 ADAP00813 363 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 IGF2P01344 180 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 ASAH2BP0C7U1 165 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 RHCEP18577 417 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 IFNA8P32881 189 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 PEX19P40855 299 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 TSC22D1Q15714 1073 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 MTX3Q5HYI7 312 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 ANKRD34AQ69YU3 496 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 NHLRC1Q6VVB1 395 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 CYP4Z1Q86W10 505 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 CADM1Q9BY67 442 aaKnown RBP16.06■□□□□ 0.16
NPHP4-210ENST00000506941 MED31Q9Y3C7 131 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 TESMINQ9Y4I5 508 aa16.06■□□□□ 0.16
NPHP4-210ENST00000506941 A0A087WUU8 490 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SH3D21A4FU49 640 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-210ENST00000506941 OR7A10O76100 309 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF43P17038 809 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 PSMB1P20618 241 aaKnown RBP16.05■□□□□ 0.16
NPHP4-210ENST00000506941 COX5AP20674 150 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 IGHV1-2P23083 117 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SELENOPP49908 381 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 FOXG1P55316 489 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-210ENST00000506941 CLDN17P56750 224 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 IL1RL1Q01638 556 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 LGALS3BPQ08380 585 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 PUDPQ08623 228 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 TSPO2Q5TGU0 170 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 FBXW9Q5XUX1 488 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 TBPL2Q6SJ96 375 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 AAED1Q7RTV5 226 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
NPHP4-210ENST00000506941 WDFY1Q8IWB7 410 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 NRMQ8IXM6 262 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SLC7A13Q8TCU3 470 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 FAM222BQ8WU58 562 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SGTBQ96EQ0 304 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 DHRS1Q96LJ7 313 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 WFIKKN1Q96NZ8 548 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SEPHS2Q99611 448 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 PIP5K1AQ99755 562 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 IL1RAPQ9NPH3 570 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 SLC7A10Q9NS82 523 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 PARPBPQ9NWS1 579 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 TAS2R5Q9NYW4 299 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 MALT1Q9UDY8 824 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 PDZD2O15018 2839 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 CSMD2Q7Z408 3487 aa16.05■□□□□ 0.16
NPHP4-210ENST00000506941 A0A1W2PRQ8 180 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 C11orf98E9PRG8 122 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms