RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ASPNQ9BXN1 380 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 FKRPQ9H9S5 495 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 KRCC1Q9NPI7 259 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 MEPEQ9NQ76 525 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 NANSQ9NR45 359 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 C20orf141Q9NUB4 165 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 TMCC3Q9ULS5 477 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 SAMHD1Q9Y3Z3 626 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 AP4S1Q9Y587 144 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 LYVE1Q9Y5Y7 322 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 ARHGAP21Q5T5U3 1957 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 KIAA1549Q9HCM3 1950 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 PHF3Q92576 2039 aaKnown RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 HTR3EA5X5Y0 456 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 AQP7P3A6NL99 342 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 LRRN3E7EW58 273 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 M0R082 166 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 OR10H3O60404 316 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CYTIPO60759 359 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 DEAF1O75398 565 aaPredicted RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 E2F6O75461 281 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 OR7A10O76100 309 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 PLGP00747 810 aaPredicted RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 IGF2P01344 180 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 FCGR1AP12314 374 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 TIMP3P35625 211 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CTBP2P56545 445 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
NUP54-203ENST00000504173 PRKCDQ05655 676 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 PPP1R8Q12972 351 aaKnown RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 RNPS1Q15287 305 aaKnown RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 SEC23BQ15437 767 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 GTF2IRD2BQ6EKJ0 949 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ABLIM2Q6H8Q1 611 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 OR2A2Q6IF42 318 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ZFP1Q6P2D0 407 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 TBPL2Q6SJ96 375 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 SLC46A3Q7Z3Q1 461 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 GTF2IRD2Q86UP8 949 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CCDC103Q8IW40 242 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CDK20Q8IZL9 346 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 RNF113BQ8IZP6 322 aaKnown RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 SLC43A2Q8N370 569 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ZNF808Q8N4W9 903 aaPredicted RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 TMEM99Q8N816 258 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 OR4K5Q8NGD3 323 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ZNF417Q8TAU3 575 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 RNF128Q8TEB7 428 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ABHD3Q8WU67 409 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 INTS12Q96CB8 462 aaKnown RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 BPIFA2Q96DR5 249 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CCDC120Q96HB5 630 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ZFP3Q96NJ6 502 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 MOGAT1Q96PD6 335 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ZNF587Q96SQ5 575 aaPredicted RBP8.94□□□□□ -0.98
NUP54-203ENST00000504173 FUZQ9BT04 418 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 RNF122Q9H9V4 155 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 ARMC1Q9NVT9 282 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 VNN3Q9NY84 501 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 KLHL9Q9P2J3 617 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 KLHL13Q9P2N7 655 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 DNAJB9Q9UBS3 223 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 TMEM5Q9Y2B1 443 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 CORINQ9Y5Q5 1042 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 U3KQV3 271 aa8.94□□□□□ -0.98
NUP54-203ENST00000504173 MYO7BQ6PIF6 2116 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ABCA4P78363 2273 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 A0A0G2JNJ9 132 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 SH3PXD2BA1X283 911 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 HSPB2A8KAH6 182 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 EFCAB9A8MZ26 197 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ZNF814B7Z6K7 855 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 CLOCKO15516 846 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 RAMP1O60894 148 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 FZD7O75084 574 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ENTPD5O75356 428 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 TOXO94900 526 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 CCNB2O95067 398 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 RCBTB2O95199 551 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 OR6A2O95222 327 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 HIST1H2ABP04908 130 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 TMIGD3P0DMS9 266 aaPredicted RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 SAGP10523 405 aaPredicted RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 FUT1P19526 365 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 FASP25445 335 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 CEACAM8P31997 349 aaPredicted RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 IFNGR2P38484 337 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 GPR4P46093 362 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 SMSP52788 366 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 HMGA2P52926 109 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 H3F3AP84243 136 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ADORA2A-AS1P86434 159 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 IL1RL1Q01638 556 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 RASGEF1BQ0VAM2 473 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 PMS2P3Q13401 168 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 GK3PQ14409 553 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ATP6AP1Q15904 470 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 HSPB2Q16082 182 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 TMEM225Q6GV28 225 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 H1FNTQ75WM6 255 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms