RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 FBXO36Q8NEA4 188 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CCDC110Q8TBZ0 833 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 AGAP11Q8TF27 550 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TFB1MQ8WVM0 346 aaKnown RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 NTAN1Q96AB6 310 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SENP8Q96LD8 212 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 C9orf72Q96LT7 481 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 GLT1D1Q96MS3 346 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 VAT1Q99536 393 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SNRNP25Q9BV90 132 aaKnown RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TBC1D10AQ9BXI6 508 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CUTCQ9NTM9 273 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ETNK2Q9NVF9 386 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 UTP6Q9NYH9 597 aaKnown RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ATP6V1HQ9UI12 483 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 EXOSC1Q9Y3B2 195 aaKnown RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 HES2Q9Y543 173 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 HEY1Q9Y5J3 304 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 DOCK5Q9H7D0 1870 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 PLXNA1Q9UIW2 1896 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 WASHC1A8K0Z3 465 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 WASH3PC4AMC7 463 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 DCTN3O75935 186 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SNRPAP09012 282 aaKnown RBP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SNRPCP09234 159 aaKnown RBP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 TROVE2P10155 538 aaKnown RBP eCLIP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SLC2A3P11169 496 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 LAMP1P11279 417 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 NEFHP12036 1026 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 CCDC130P13994 396 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 OR1D4P47884 311 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 PRMT2P55345 433 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 ADIGQ0VDE8 80 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SMARCB1Q12824 385 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 PDZK1IP1Q13113 114 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 PRPSAP1Q14558 356 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 KCNJ11Q14654 390 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 BRMS1LQ5PSV4 323 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 ZNF774Q6NX45 483 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 CXCL17Q6UXB2 119 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 WASH2PQ6VEQ5 465 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 RGS9BPQ6ZS82 235 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SLC26A11Q86WA9 606 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 LRRC6Q86X45 466 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 DEFB106AQ8N104 65 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 RAB3IL1Q8TBN0 382 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 HTR3CQ8WXA8 447 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 NT5C3BQ969T7 300 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 VSTM2LQ96N03 204 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 QKIQ96PU8 341 aaKnown RBP eCLIP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 CSPG4P5Q96PW8 444 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 TGS1Q96RS0 853 aaKnown RBP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 NPY6RQ99463 290 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 APOL2Q9BQE5 337 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 PYGO2Q9BRQ0 406 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 TRABDQ9H4I3 376 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 FAM96AQ9H5X1 160 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 COQ10BQ9H8M1 238 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 CALHM2Q9HA72 323 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 CSNK1G1Q9HCP0 422 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 DMAP1Q9NPF5 467 aaPredicted RBP4.78□□□□□ -1.64
NEDD4-203ENST00000502612 SLC2A6Q9UGQ3 507 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 TBK1Q9UHD2 729 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 NTNG1Q9Y2I2 539 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 ARL2BPQ9Y2Y0 163 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 MYH10P35580 1976 aa4.78□□□□□ -1.64
NEDD4-203ENST00000502612 RALGAPA2Q2PPJ7 1873 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 A0A087WZY1 265 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 ARL5CA6NH57 179 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 GOLGA8MH3BSY2 632 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 BCL2L11O43521 198 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 B3GAT3O94766 335 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 JCHAINP01591 159 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 ASGR1P07306 291 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 IGFBP1P08833 259 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-203ENST00000502612 IGFBP5P24593 272 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 IL2RGP31785 369 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 DLSTP36957 453 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 IFNAR2P48551 515 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 MAP3K7CLP57077 242 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 DAOAP59103 153 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 TPI1P60174 286 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 MGAT3Q09327 533 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 IFT88Q13099 833 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 SCGB2A2Q13296 93 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 PAFAH1B3Q15102 231 aaKnown RBP4.77□□□□□ -1.65
NEDD4-203ENST00000502612 PDK4Q16654 411 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 MICAQ29983 383 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 C15orf32Q32M92 178 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 TTC31Q49AM3 519 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-203ENST00000502612 WSCD1Q658N2 575 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 LRRC8BQ6P9F7 803 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 C6orf89Q6UWU4 347 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 CLEC20AQ6ZU45 233 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 LINC00523Q86TU6 105 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 PARGQ86W56 976 aa4.77□□□□□ -1.65
NEDD4-203ENST00000502612 C10orf67Q8IYJ2 551 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms