RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 NDNFQ8TB73 568 aa16.07■□□□□ 0.16
CHRNA4-206ENST00000498043 PSMF1Q92530 271 aa16.07■□□□□ 0.16
CHRNA4-206ENST00000498043 DDIT4LQ96D03 193 aa16.07■□□□□ 0.16
CHRNA4-206ENST00000498043 GRHPRQ9UBQ7 328 aa16.07■□□□□ 0.16
CHRNA4-206ENST00000498043 TMEM129A0AVI4 362 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 FTCDNL1E5RQL4 147 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 M0R3G1 203 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 CCRL2O00421 344 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 RNF13O43567 381 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 OR2T1O43869 369 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 AIREO43918 545 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 EFNA2O43921 213 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 F10P00742 488 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 SCG5P05408 212 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 NOVA1P51513 510 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 LIMK1P53667 647 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 KRR1Q13601 381 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 OR7A5Q15622 319 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ARMC4Q5T2S8 1044 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 PSD4Q8NDX1 1056 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 GATAD2BQ8WXI9 593 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ZMYND19Q96E35 227 aaPredicted RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ASPNQ9BXN1 380 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ERVK13-1Q9NX77 482 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 A0A0G2JMM0 328 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 A0A1W2PPB8 328 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 A0A1W2PRS3 328 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 C12orf71A8MTZ7 269 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 KIR3DP1A8MWS1 328 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 CDRT15L2A8MXV6 281 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 H7C1C5 153 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 J3QRE1 110 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ZNF208O43345 1280 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 APEHP13798 732 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 CSRP1P21291 193 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 GTF2E2P29084 291 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 CDKN2AP42771 156 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 LCN6P62502 163 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 MESTQ5EB52 335 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 DCAF10Q5QP82 559 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 OR10H4Q8NGA5 316 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 SMAP2Q8WU79 429 aaPredicted RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 GNRHR2Q96P88 292 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 BCL7BQ9BQE9 202 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 OR51E2Q9H255 320 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ADGRL4Q9HBW9 690 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 ASB6Q9NWX5 421 aa16.06■□□□□ 0.16
CHRNA4-206ENST00000498043 DOCK10Q96BY6 2186 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 LOC100506127A0A0U1RQW1 187 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 SNPHO15079 494 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 SLC22A1O15245 554 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 OPN1LWP04000 364 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 MLLT11Q13015 90 aaPredicted RBP16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 GLYR1Q49A26 553 aaPredicted RBP16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 C3orf33Q6P1S2 294 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 ZNRF4Q8WWF5 429 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 SGCZQ96LD1 299 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 INIPQ9NRY2 104 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 RPH3AQ9Y2J0 694 aaPredicted RBP16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 CELSR3Q9NYQ7 3312 aa16.05■□□□□ 0.16
CHRNA4-206ENST00000498043 PNMA8CA0A1B0GUJ8 204 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 OR6A2O95222 327 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 LIFP15018 202 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 SPI1P17947 270 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 IDUAP35475 653 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 DNASE1L1P49184 302 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 CLK1P49759 484 aaKnown RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 OC90Q02509 493 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 TMED1Q13445 227 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 SOWAHCQ53LP3 525 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ASCL5Q7RTU5 278 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ZBTB46Q86UZ6 589 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ATCAYQ86WG3 371 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 OR1J4Q8NGS1 313 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 OR6K6Q8NGW6 343 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 KIAA1143Q96AT1 154 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 UBL7Q96S82 380 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 DDOQ99489 341 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 CHCHD6Q9BRQ6 235 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ZNF649Q9BS31 505 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ASCL3Q9NQ33 180 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 MRPL39Q9NYK5 338 aaKnown RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 PLPP3O14495 311 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 TXNDC12O95881 172 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 BCL10O95999 233 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 P04436 131 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 SBK2P0C263 348 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 IMPDH2P12268 514 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 ITGA3P26006 1051 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 CD82P27701 267 aa16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 SH3BGRP55822 239 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
CHRNA4-206ENST00000498043 LIPKQ5VXJ0 399 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms