RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 LRTM1Q9HBL6 345 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC25A19Q9HC21 320 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 RAB18Q9NP72 206 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 SIX2Q9NPC8 291 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 RPRD1BQ9NQG5 326 aaKnown RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ECHDC1Q9NTX5 307 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 NUDT15Q9NV35 164 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ASF1BQ9NVP2 202 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 OCIAD1Q9NX40 245 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 UTP6Q9NYH9 597 aaKnown RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZMAT5Q9UDW3 170 aaKnown RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZNHIT2Q9UHR6 403 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ING1Q9UK53 422 aaPredicted RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 POMT2Q9UKY4 750 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 SRRM2Q9UQ35 2752 aaKnown RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 PPP2R2CQ9Y2T4 447 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 CSDC2Q9Y534 153 aaKnown RBP2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 PEX16Q9Y5Y5 336 aa2.04□□□□□ -2.08
CKS1BP2-201ENST00000497342 ARID1AO14497 2285 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TRBV5-4A0A0C4DH59 114 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TRBV7-9A0A0J9YWB2 115 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 A0A1B0GUH1 482 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 A0A1B0GUV1 79 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 IQCMA0A1B0GVH7 501 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 CCDC182A6NF36 153 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 C15orf61A6NNL5 157 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 C9JVG2 144 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 NPIPB9F8W1W9 429 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 K7EQD1 137 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TRAFD1O14545 582 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 RAMP3O60896 148 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ANXA9O76027 345 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 NR3C1P04150 777 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 S100A9P06702 114 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 STSP08842 583 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 HBQ1P09105 142 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 UBTFL6P0CB48 400 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 MCF2P10911 925 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 MSR1P21757 451 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 PCMT1P22061 227 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 PRDX3P30048 256 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 BMI1P35226 326 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SAA4P35542 130 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 VHLP40337 213 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 MAP3K8P41279 467 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC1A4P43007 532 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SSR1P43307 286 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 MAGEA1P43355 309 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SYKP43405 635 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ARRB1P49407 418 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DAOAP59103 153 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ABCE1P61221 599 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 HAND2P61296 217 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 OSTNP61366 133 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 OGDHQ02218 1023 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TGM3Q08188 693 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 RAB40BQ12829 278 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 CDC20Q12834 499 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 KLF9Q13886 244 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 GK3PQ14409 553 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 PDGFRLQ15198 375 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC5A12Q1EHB4 618 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 C10orf120Q5SQS8 335 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DCAF12Q5T6F0 453 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 PIP5KL1Q5T9C9 394 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 WSCD1Q658N2 575 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 KIAA1161Q6NSJ0 714 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TMEM107Q6UX40 140 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZNF730Q6ZMV8 503 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 CREB3L2Q70SY1 520 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 CEACAM19Q7Z692 300 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DHDDSQ86SQ9 333 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 HIPK1Q86Z02 1210 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 KRTAP19-1Q8IUB9 90 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 IQCF2Q8IXL9 164 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TMEM123Q8N131 208 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 FBXL14Q8N1E6 418 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DHRSXQ8N5I4 330 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 RFLNBQ8N5W9 214 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TCEANCQ8N8B7 351 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 BBOF1Q8ND07 529 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ST6GALNAC3Q8NDV1 305 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 CATSPER1Q8NEC5 780 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DMBX1Q8NFW5 382 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 OR10G7Q8NGN6 311 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZNF461Q8TAF7 563 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 MAPK15Q8TD08 544 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DTX3LQ8TDB6 740 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 AENQ8WTP8 325 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 STARD8Q92502 1023 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 C10orf35Q96D05 121 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC45A3Q96JT2 553 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ALKBH3Q96Q83 286 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC6A7Q99884 636 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 RIOK1Q9BRS2 568 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 LIME1Q9H400 295 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 RHOJQ9H4E5 214 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 AZI2Q9H6S1 392 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 NT5MQ9NPB1 228 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZDHHC4Q9NPG8 344 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms