RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ZNF814B7Z6K7 855 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 RAMP1O60894 148 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 DNAJC8O75937 253 aaPredicted RBP14.49□□□□□ -0.09
SF3A1-209ENST00000496189 MT-ATP6P00846 226 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 HOXC12P31275 282 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 NR1H2P55055 460 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 KRTAP10-9P60411 292 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 EGR4Q05215 589 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 ST3GAL3Q11203 375 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 POU4F3Q15319 338 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 STK11Q15831 433 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 BEX5Q5H9J7 111 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 ALKBH2Q6NS38 261 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
SF3A1-209ENST00000496189 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.49□□□□□ -0.09
SF3A1-209ENST00000496189 WFDC8Q8IUA0 241 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 POMGNT2Q8NAT1 580 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 TAAR8Q969N4 342 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 TMEM45BQ96B21 275 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 S100PBPQ96BU1 408 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 PYURFQ96I23 114 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 PRRC1Q96M27 445 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 LRGUKQ96M69 825 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 TRIM15Q9C019 465 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 RIMS3Q9UJD0 308 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 APCP25054 2843 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 FTCDNL1E5RQL4 147 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 M0R082 166 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 EBAG9O00559 213 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 LYZL6O75951 148 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 PDE5AO76074 875 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 OR6A2O95222 327 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 IGHV3-9P01782 118 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 HIST1H2ABP04908 130 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 ITGA2P17301 1181 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 GRPRP30550 384 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 FAPQ12884 760 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 PMS2P3Q13401 168 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 PIN1Q13526 163 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-209ENST00000496189 OR7E24Q6IFN5 339 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 CCDC121Q6ZUS5 278 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 HIST3H2AQ7L7L0 130 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 P2RY8Q86VZ1 359 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 SCAIQ8N9R8 606 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 ADPRHL1Q8NDY3 354 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 ZNF417Q8TAU3 575 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 HIST1H2ACQ93077 130 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 SLC7A6OSQ96CW6 309 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-209ENST00000496189 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 HS6ST2Q96MM7 605 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 OXGR1Q96P68 337 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 ZNF587Q96SQ5 575 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-209ENST00000496189 PTDSS2Q9BVG9 487 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 FNDC11Q9BVV2 318 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 SLC19A3Q9BZV2 496 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 AMBRA1Q9C0C7 1298 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 SLCO5A1Q9H2Y9 848 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 TAS2R16Q9NYV7 291 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 MALT1Q9UDY8 824 aa14.48□□□□□ -0.09
SF3A1-209ENST00000496189 DCHS2Q6V1P9 2916 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 HRGP04196 525 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 UMPSP11172 480 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 CBLP22681 906 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 DNASE1P24855 282 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 DNAJA1P31689 397 aaKnown RBP14.47□□□□□ -0.09
SF3A1-209ENST00000496189 RBM34P42696 430 aaKnown RBP14.47□□□□□ -0.09
SF3A1-209ENST00000496189 TRAP1Q12931 704 aaKnown RBP14.47□□□□□ -0.09
SF3A1-209ENST00000496189 NIPAL3Q6P499 406 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 LINC00114Q6XXX2 140 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 CREB3L2Q70SY1 520 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 P3H2Q8IVL5 708 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 UEVLDQ8IX04 471 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 CCDC124Q96CT7 223 aaKnown RBP14.47□□□□□ -0.09
SF3A1-209ENST00000496189 MMADHCQ9H3L0 296 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-209ENST00000496189 ENPP4Q9Y6X5 453 aa14.47□□□□□ -0.09
SF3A1-209ENST00000496189 TEX15Q9BXT5 2789 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 IGKV1D-42A0A075B6H8 117 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 RAD51DO75771 328 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 RHCEP18577 417 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 COX5AP20674 150 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 PTNP21246 168 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 KEAP1Q14145 624 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 TSC22D1Q15714 1073 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 TIMM23BQ5SRD1 257 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 LCN8Q6JVE9 175 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 CYP2R1Q6VVX0 501 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 NINJ1Q92982 152 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 CLPTM1LQ96KA5 538 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 ESRP2Q9H6T0 727 aaKnown RBP14.46□□□□□ -0.09
SF3A1-209ENST00000496189 NANSQ9NR45 359 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 ITGB1BP2Q9UKP3 347 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 A4GNTQ9UNA3 340 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 RCE1Q9Y256 329 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 V9GYQ6 96 aa14.46□□□□□ -0.09
SF3A1-209ENST00000496189 MPDZO75970 2070 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 HTR3EA5X5Y0 456 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF587BE7ETH6 402 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 KPNA4O00629 521 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-209ENST00000496189 GSC2O15499 205 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 SLC43A1O75387 559 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms