RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 DCTN6O00399 190 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ARPC1BO15143 372 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CTDSPLO15194 276 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CT45A8P0DMV1 189 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CT45A9P0DMV2 189 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 DCTDP32321 178 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 AQP2P41181 271 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RAD52P43351 418 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 TNFRSF4P43489 277 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 PTH2RP49190 550 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RAB38P57729 211 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CT45A2Q5DJT8 189 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 SLC25A25Q6KCM7 469 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 FGD2Q7Z6J4 655 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RBM18Q96H35 190 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RBP7Q96R05 134 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 LMF2Q9BU23 707 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CA10Q9NS85 328 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 COQ3Q9NZJ6 369 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 PPIEQ9UNP9 301 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF281Q9Y2X9 895 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 A0A0J9YY10 115 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 NPIPB9F8W1W9 429 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 H7C1C5 153 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 PSMB1P20618 241 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 HNRNPA2B1P22626 353 aaKnown RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 CAPZA2P47755 286 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 BLVRAP53004 296 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 RAG2P55895 527 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 LCN6P62502 163 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 HSF2Q03933 536 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 PUDPQ08623 228 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 STX4Q12846 297 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ODF4Q2M2E3 257 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 DPY19L2P2Q6ZN68 376 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 Q6ZSR6 202 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 METTL27Q8N6F8 245 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 AVL9Q8NBF6 648 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 OR13H1Q8NG92 308 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 KLHDC3Q9BQ90 382 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ALG12Q9BV10 488 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 NMNAT2Q9BZQ4 307 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 SEMA4CQ9C0C4 833 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-217ENST00000495688 OR5V1Q9UGF6 321 aa11.89□□□□□ -0.51
PTPN7-217ENST00000495688 IGKV1D-42A0A075B6H8 117 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 I3L521 148 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 KHNYNO15037 678 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 KHDRBS3O75525 346 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 APBB3O95704 486 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 F13BP05160 661 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 HOXC4P09017 264 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ADRA2CP18825 462 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 MAOAP21397 527 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 PBX2P40425 430 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 C1orf61Q13536 156 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 GAS6Q14393 721 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 GPR139Q6DWJ6 353 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 PWWP2BQ6NUJ5 590 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 PMM1Q92871 262 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 MOGAT1Q96PD6 335 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 C7orf50Q9BRJ6 194 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 SCP2D1Q9UJQ7 156 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 V9GY05 133 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 A0A1B0GVI7 797 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 OIP5O43482 229 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 GMFGO60234 142 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 PDGFAP04085 211 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 CDK2P24941 298 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 GPR143P51810 404 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF141Q15928 474 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 LINC00303Q3SY05 128 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF550Q7Z398 422 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 C10orf53Q8N6V4 93 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 C16orf52Q8NHV5 167 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 C1orf216Q8TAB5 229 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 SRA1Q9HD15 236 aaKnown RBP11.88□□□□□ -0.51
PTPN7-217ENST00000495688 ERVK-19Q9WJR5 959 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 OR10H1Q9Y4A9 318 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 PCDHGA5Q9Y5G8 931 aa11.88□□□□□ -0.51
PTPN7-217ENST00000495688 SERINC4A6NH21 518 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TVP23AA6NH52 213 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 GABARAPH6UMI1 98 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 GPANK1O95872 356 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms