RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 UPK3AO75631 287 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 SERPINI2O75830 405 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 KRT33AO76009 404 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 VAMP5O95183 116 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 LYPD3O95274 346 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 CD3EP07766 207 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF43P17038 809 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 OR1E2P47887 323 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 NUDT2P50583 147 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF83P51522 516 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 SLC7A2P52569 658 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 SLC25A3Q00325 362 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 TIMM23BQ5SRD1 257 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ERICH5Q6P6B1 374 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF613Q6PF04 617 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 LINGO2Q7L985 606 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 SLC15A3Q8IY34 581 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 MICU2Q8IYU8 434 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 LILRB1Q8NHL6 650 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-224ENST00000494132 PROX1Q92786 737 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 TPD52L3Q96J77 140 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 TMEM204Q9BSN7 226 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
ATG4B-224ENST00000494132 RNF115Q9Y4L5 304 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ACANP16112 2415 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 ELOVL7A1L3X0 281 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 NME4O00746 187 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 SNX3O60493 162 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 FMO6PO60774 539 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 HLA-DOBP13765 273 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 LIPEQ05469 1076 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 C1DQ13901 141 aaKnown RBP12.91□□□□□ -0.34
ATG4B-224ENST00000494132 VEZF1Q14119 521 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 HIKESHIQ53FT3 197 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 C5orf46Q6UWT4 87 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 CPLX4Q7Z7G2 160 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 RASSF5Q8WWW0 418 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 OXGR1Q96P68 337 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 EPYCQ99645 322 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 NSRP1Q9H0G5 558 aaKnown RBP12.91□□□□□ -0.34
ATG4B-224ENST00000494132 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 EVA1AQ9H8M9 152 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 NGBQ9NPG2 151 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 SLC25A15Q9Y619 301 aa12.91□□□□□ -0.34
ATG4B-224ENST00000494132 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 C11orf98E9PRG8 122 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 MS4A18H0YCH9 400 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 M0R1B8 84 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 ABCD4O14678 606 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 HS3ST1O14792 307 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 TRAF3IP2O43734 574 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 FZD7O75084 574 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 MPGP29372 298 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 KDELR2P33947 212 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 ADAM8P78325 824 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 POU3F1Q03052 451 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 PMS2P3Q13401 168 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 MS4A18Q3C1V0 323 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 C20orf204Q6ZNR8 217 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 H1FNTQ75WM6 255 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 KRTAP1-3Q8IUG1 177 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 WDFY1Q8IWB7 410 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 WDR31Q8NA23 367 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 PERPQ96FX8 193 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 SLC41A3Q96GZ6 507 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 MUS81Q96NY9 551 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 PRSS27Q9BQR3 290 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 TMEM43Q9BTV4 400 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 EMC6Q9BV81 110 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 ASPNQ9BXN1 380 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 EFCAB1Q9HAE3 211 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-224ENST00000494132 MED29Q9NX70 200 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 BAG5Q9UL15 447 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 B3GALT5Q9Y2C3 310 aa12.9□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 SMPD2O60906 423 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 CH25HO95992 272 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 NCK1P16333 377 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 AHCYP23526 432 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 GSK3BP49841 420 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TAS2R41P59536 307 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TUBA1BP68363 451 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TUBA4AP68366 448 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 PIN1Q13526 163 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-224ENST00000494132 PHYHD1Q5SRE7 291 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms