RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CH25HO95992 272 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 IGHV3-9P01782 118 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 MT-ND1P03886 318 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 UMPSP11172 480 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF43P17038 809 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 PSMB1P20618 241 aaKnown RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 IL32P24001 234 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 NTF4P34130 210 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 UGT2B15P54855 530 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 TRAM2Q15035 370 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 P2RY6Q15077 328 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF74Q16587 644 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 SFRP5Q5T4F7 317 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 FBXW9Q5XUX1 488 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ANKRD34AQ69YU3 496 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 AAED1Q7RTV5 226 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 FAM86B1Q8N7N1 296 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 OR5J2Q8NH18 312 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 PFN4Q8NHR9 129 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 KISS1RQ969F8 398 aaPredicted RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 PYURFQ96I23 114 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 HS6ST2Q96MM7 605 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 OXGR1Q96P68 337 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF385AQ96PM9 386 aaKnown RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 HDHD5Q9BXW7 423 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 MUC13Q9H3R2 512 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 FKRPQ9H9S5 495 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 MRPL39Q9NYK5 338 aaKnown RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 RHCGQ9UBD6 479 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 UPB1Q9UBR1 384 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 MED31Q9Y3C7 131 aa11.31□□□□□ -0.6
CLIP2-209ENST00000493166 FAM32AQ9Y421 112 aaKnown RBP11.31□□□□□ -0.6
CLIP2-209ENST00000493166 A6NNC1 897 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ENO4A6NNW6 628 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 CASKO14936 926 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 GYG2O15488 501 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 OR6A2O95222 327 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 PPP3CBP16298 524 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 AHCYP23526 432 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 PUDPQ08623 228 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 FAPQ12884 760 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ITGADQ13349 1161 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 DNAL1Q4LDG9 190 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 CYP2R1Q6VVX0 501 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 TMEM200AQ86VY9 491 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 STEAP2Q8NFT2 490 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 MCUR1Q96AQ8 359 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ZC3HAV1LQ96H79 300 aaKnown RBP11.3□□□□□ -0.6
CLIP2-209ENST00000493166 WFIKKN1Q96NZ8 548 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 THTPAQ9BU02 230 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 OR10A4Q9H209 315 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 SLCO5A1Q9H2Y9 848 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 MCCC2Q9HCC0 563 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 MEPEQ9NQ76 525 aaPredicted RBP11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ASB6Q9NWX5 421 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF226Q9NYT6 803 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ACTR3BQ9P1U1 418 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF229Q9UJW7 825 aa11.3□□□□□ -0.6
CLIP2-209ENST00000493166 ANKRD17O75179 2603 aaKnown RBP11.29□□□□□ -0.6
CLIP2-209ENST00000493166 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 C11orf98E9PRG8 122 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 PLPP3O14495 311 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 FFAR1O14842 300 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 AKAP8O43823 692 aaKnown RBP11.29□□□□□ -0.6
CLIP2-209ENST00000493166 PIP5K1CO60331 668 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 LYZL6O75951 148 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 KRT33AO76009 404 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 PRSS23O95084 383 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 STAMBPO95630 424 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 HPRP00739 348 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 IGF2P01344 180 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 ITGA2P17301 1181 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 RHCEP18577 417 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 COX5AP20674 150 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 ATP6V1B2P21281 511 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 SELENOPP49908 381 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 CLDN17P56750 224 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 VLDLRP98155 873 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 POU3F1Q03052 451 aaPredicted RBP11.29□□□□□ -0.6
CLIP2-209ENST00000493166 DAZAP2Q15038 168 aaPredicted RBP11.29□□□□□ -0.6
CLIP2-209ENST00000493166 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 NIPAL3Q6P499 406 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms