RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 C1GALT1C1Q96EU7 318 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 SH3GL3Q99963 347 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 ASB6Q9NWX5 421 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 MED11Q9P086 117 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 MOKQ9UQ07 419 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
PTPN7-216ENST00000492977 WIF1Q9Y5W5 379 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 NSG1A0A0A6YYJ2 146 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TRDV1A0A1B0GX56 115 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF208O43345 1280 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 ITGA10O75578 1167 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 WISP1O95388 367 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 AHSA1O95433 338 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 DLGAP3O95886 979 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 F13BP05160 661 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 JMJD7P0C870 316 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 GAAP10253 952 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 GALP22466 123 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 CASP3P42574 277 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TAS2R43P59537 309 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 RPS25P62851 125 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 LEG1Q6P5S2 330 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TMEM81Q6P7N7 255 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 OPN5Q6U736 354 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 DND1Q8IYX4 353 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 LSM14AQ8ND56 463 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TMEM203Q969S6 136 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 ZMYND19Q96E35 227 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 CNN2Q99439 309 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TBX5Q99593 518 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.37
PTPN7-216ENST00000492977 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 PISDQ9UG56 409 aa12.71□□□□□ -0.37
PTPN7-216ENST00000492977 A0A075B6Q4 140 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 PNMA8CA0A1B0GUJ8 204 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 A0A1W2PQL4 384 aaPredicted RBP12.7□□□□□ -0.38
PTPN7-216ENST00000492977 GLCEO94923 617 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 IL1AP01583 271 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 ICAM2P13598 275 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 CD53P19397 219 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 CELP19835 753 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 RPS19P39019 145 aaKnown RBP12.7□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF41P51814 821 aaPredicted RBP12.7□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF85Q03923 595 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
PTPN7-216ENST00000492977 SSPNQ14714 243 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 BICRALQ6AI39 1079 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 C16orf87Q6PH81 154 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 MRPL48Q96GC5 212 aaKnown RBP12.7□□□□□ -0.38
PTPN7-216ENST00000492977 MRGPRX4Q96LA9 322 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 KCTD7Q96MP8 289 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 MED18Q9BUE0 208 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 SPRY4Q9C004 299 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 TOR4AQ9NXH8 423 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 TCFL5Q9UL49 500 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 B3GNT3Q9Y2A9 372 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 PCDHGA1Q9Y5H4 931 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 CORINQ9Y5Q5 1042 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 PEX16Q9Y5Y5 336 aa12.7□□□□□ -0.38
PTPN7-216ENST00000492977 B4DXG7 233 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MT-CO3P00414 261 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 RENP00797 406 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 BMP4P12644 408 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TCN2P20062 427 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 S100A5P33763 92 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 RORCP51449 518 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ACTA2P62736 377 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ACTG2P63267 376 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 FABP5Q01469 135 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 DBPQ10586 325 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 KRR1Q13601 381 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 INAQ16352 499 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TUBA3EQ6PEY2 450 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ARSKQ6UWY0 536 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ARMC10Q8N2F6 343 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ZFP41Q8N8Y5 198 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 EXD3Q8N9H8 876 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ZPLD1Q8TCW7 415 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 DDIT4LQ96D03 193 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TM9SF2Q99805 663 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms