RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 USB1Q9BQ65 265 aaKnown RBP13.57□□□□□ -0.24
VPS26A-207ENST00000490696 POLR2J2Q9GZM3 115 aaKnown RBP13.57□□□□□ -0.24
VPS26A-207ENST00000490696 POLR2J3Q9H1A7 115 aaKnown RBP13.57□□□□□ -0.24
VPS26A-207ENST00000490696 LIME1Q9H400 295 aa13.57□□□□□ -0.24
VPS26A-207ENST00000490696 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
VPS26A-207ENST00000490696 SLC7A10Q9NS82 523 aa13.57□□□□□ -0.24
VPS26A-207ENST00000490696 ASB6Q9NWX5 421 aa13.57□□□□□ -0.24
VPS26A-207ENST00000490696 OTOGQ6ZRI0 2925 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 LRRN3E7EW58 273 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 MS4A18H0YCH9 400 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 OR5F1O95221 314 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 MT-ATP6P00846 226 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 NCK1P16333 377 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 FOXG1P55316 489 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-207ENST00000490696 TAS2R41P59536 307 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 FAPQ12884 760 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 PIN1Q13526 163 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-207ENST00000490696 TAB1Q15750 504 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-207ENST00000490696 SEZ6L2Q6UXD5 910 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 HSD17B8Q92506 261 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 PIK3IP1Q96FE7 263 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 SLC19A3Q9BZV2 496 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 SLCO5A1Q9H2Y9 848 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 MRPL39Q9NYK5 338 aaKnown RBP13.56□□□□□ -0.24
VPS26A-207ENST00000490696 ADA2Q9NZK5 511 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 RIMS3Q9UJD0 308 aa13.56□□□□□ -0.24
VPS26A-207ENST00000490696 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-207ENST00000490696 ZNF432O94892 652 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 HPRP00739 348 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 SERPINA1P01009 418 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 ITGA5P08648 1049 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 ZNF43P17038 809 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 DNAJA1P31689 397 aaKnown RBP13.55□□□□□ -0.24
VPS26A-207ENST00000490696 SELENOPP49908 381 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 ZNF74Q16587 644 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 FXNQ16595 210 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 C10orf53Q8N6V4 93 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 RNF148Q8N7C7 305 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 HS3ST6Q96QI5 342 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 ASPNQ9BXN1 380 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 MEPEQ9NQ76 525 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-207ENST00000490696 TAS2R16Q9NYV7 291 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 UPB1Q9UBR1 384 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 EGFL7Q9UHF1 273 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 A4GNTQ9UNA3 340 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
VPS26A-207ENST00000490696 CADP27708 2225 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 PLPP3O14495 311 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-207ENST00000490696 ZNF682O95780 498 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 CH25HO95992 272 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 THRBP10828 461 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 HSD17B1P14061 328 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 NQO1P15559 274 aaKnown RBP13.54□□□□□ -0.24
VPS26A-207ENST00000490696 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
VPS26A-207ENST00000490696 CLDN17P56750 224 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 PMS2P3Q13401 168 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 TMEM255BQ8WV15 326 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
VPS26A-207ENST00000490696 FAM162AQ96A26 154 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 PRRC1Q96M27 445 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 FKRPQ9H9S5 495 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 CD300AQ9UGN4 299 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 ST6GALNAC2Q9UJ37 374 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 RCE1Q9Y256 329 aa13.54□□□□□ -0.24
VPS26A-207ENST00000490696 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
VPS26A-207ENST00000490696 RAD51DO75771 328 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 IFNW1P05000 195 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 HLA-DOBP13765 273 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 FUT4P22083 530 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 MPGP29372 298 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 UGT2B15P54855 530 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 LGALS3BPQ08380 585 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 PUDPQ08623 228 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
VPS26A-207ENST00000490696 STK11Q15831 433 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 GABRA6Q16445 453 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 IFI44LQ53G44 452 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
VPS26A-207ENST00000490696 GLYATQ6IB77 296 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 SLC46A3Q7Z3Q1 461 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 UEVLDQ8IX04 471 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 DEFB107AQ8IZN7 70 aa13.53□□□□□ -0.24
VPS26A-207ENST00000490696 RBM15BQ8NDT2 890 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms