RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SIRT3Q9NTG7 399 aaPredicted RBP5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 ACER3Q9NUN7 267 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 GIN1Q9NXP7 522 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 NKIRAS2Q9NYR9 191 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 UBAP1Q9NZ09 502 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 GRHL1Q9NZI5 618 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 PCTPQ9UKL6 214 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 ZNF346Q9UL40 294 aaKnown RBP5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 HDGFL3Q9Y3E1 203 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 TNPO3Q9Y5L0 923 aaKnown RBP5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 POMT1Q9Y6A1 747 aa5.97□□□□□ -1.45
PDLIM1-203ENST00000490391 NUP214P35658 2090 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF264O43296 627 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 GPR137BO60478 399 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 EIF4E2O60573 245 aaKnown RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 UPK3AO75631 287 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TFPIP10646 304 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 IMPDH2P12268 514 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 HSD3B1P14060 373 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 HSD3B2P26439 372 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 NTSP30990 170 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 CXCR5P32302 372 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ARL1P40616 181 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 SELENOPP49908 381 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 CCR4P51679 360 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 SH3BGRP55822 239 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 CD69Q07108 199 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 PCGF3Q3KNV8 242 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ALKBH6Q3KRA9 238 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM71E1Q6IPT2 247 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 USP51Q70EK9 711 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 AAED1Q7RTV5 226 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ABHD12BQ7Z5M8 362 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM139Q8IV31 216 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 PDIK1LQ8N165 341 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TMCO5AQ8N6Q1 288 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 OR9K2Q8NGE7 335 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ST7LQ8TDW4 575 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ADAMTS15Q8TE58 950 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 DACT3Q96B18 629 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 SLC47A1Q96FL8 570 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 MARS2Q96GW9 593 aaKnown RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 APIPQ96GX9 242 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TIMD4Q96H15 378 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 GPR78Q96P69 363 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 THUMPD3Q9BV44 507 aaKnown RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 BTBD2Q9BX70 525 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 EBPLQ9BY08 206 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 ACPTQ9BZG2 426 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 C16orf95Q9H693 158 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 DENND2DQ9H6A0 471 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 NPHS2Q9NP85 383 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 NOX4Q9NPH5 578 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 HINT3Q9NQE9 182 aaKnown RBP5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 CTPS2Q9NRF8 586 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 NMRK1Q9NWW6 199 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 B3GNT2Q9NY97 397 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM181Q9P2C4 612 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 CHRNA9Q9UGM1 479 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 TRAPPC4Q9Y296 219 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 DTNAQ9Y4J8 743 aa5.96□□□□□ -1.46
PDLIM1-203ENST00000490391 IGLV3-9A0A075B6K5 115 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 A0A1W2PPW3 197 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 WI2-2373I1.2A0A1W2PRP0 233 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 CCDC189A1A4V9 331 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 AGAP5A6NIR3 686 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 H3BNH8 94 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 GTPBP1O00178 669 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 TP73O15350 636 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 XPNPEP2O43895 674 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 EIF1BO60739 113 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 CLPTM1O96005 669 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 UBL4AP11441 157 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF14P17017 642 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 MAKP20794 623 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 GDNFP39905 211 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 APOBEC1P41238 236 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 GSTM5P46439 218 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SLC6A9P48067 706 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 CLK1P49759 484 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 ATP12AP54707 1039 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 OR2B6P58173 313 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 POU6F2P78424 691 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 ARF1P84077 181 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 TEKQ02763 1124 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 C2orf80Q0P641 193 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 HSPB3Q12988 150 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 HNRNPA0Q13151 305 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 NKPD1Q17RQ9 610 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 HFEQ30201 348 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 GLIPR1L2Q4G1C9 344 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SPIN4Q56A73 249 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 RPS27LQ71UM5 84 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 ZBED8Q8IZ13 594 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 PTGR2Q8N8N7 351 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 FBXO36Q8NEA4 188 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 OR10S1Q8NGN2 331 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SSMEM1Q8WWF3 244 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms