RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 IFI44LQ53G44 452 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 BEX5Q5H9J7 111 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 TSPO2Q5TGU0 170 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 ABHD12BQ7Z5M8 362 aaPredicted RBP15.31■□□□□ 0.04
MDC1-206ENST00000489540 ZNF433Q8N7K0 673 aaPredicted RBP15.31■□□□□ 0.04
MDC1-206ENST00000489540 GEMIN6Q8WXD5 167 aaKnown RBP15.31■□□□□ 0.04
MDC1-206ENST00000489540 HS6ST2Q96MM7 605 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 MOGAT1Q96PD6 335 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 CDRT15Q96T59 188 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 PRSS27Q9BQR3 290 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 NGBQ9NPG2 151 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 SLC7A10Q9NS82 523 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 TAS2R16Q9NYV7 291 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 B3GAT1Q9P2W7 334 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 SEC14L4Q9UDX3 406 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 CIB4A0PJX0 185 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 MS4A18H0YCH9 400 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 IFNW1P05000 195 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 HSD17B1P14061 328 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 NCK1P16333 377 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 PTNP21246 168 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 IL1RL1Q01638 556 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 TGFBR3Q03167 851 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 ZNF74Q16587 644 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 MS4A18Q3C1V0 323 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 TIMM23BQ5SRD1 257 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 OR7E24Q6IFN5 339 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 VTCN1Q7Z7D3 282 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 CDH24Q86UP0 819 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 WFDC8Q8IUA0 241 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 MUCL1Q96DR8 90 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 PIK3IP1Q96FE7 263 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 PRRC1Q96M27 445 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 SLCO5A1Q9H2Y9 848 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 GORASP2Q9H8Y8 452 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 FKRPQ9H9S5 495 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 EGFL7Q9UHF1 273 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 RCE1Q9Y256 329 aa15.3■□□□□ 0.04
MDC1-206ENST00000489540 APCP25054 2843 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 FBN2P35556 2912 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 PDLIM1O00151 329 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 PLPP3O14495 311 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 KLF4O43474 513 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 KRT33AO76009 404 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 CH25HO95992 272 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 IGF2P01344 180 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 HIST1H2ABP04908 130 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 MPGP29372 298 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
MDC1-206ENST00000489540 NR1H2P55055 460 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 CLDN17P56750 224 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 PUDPQ08623 228 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 TAB1Q15750 504 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 NIPAL3Q6P499 406 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 HIST3H2AQ7L7L0 130 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 NKAIN4Q8IVV8 208 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 UEVLDQ8IX04 471 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 DEFB107AQ8IZN7 70 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 OR5J2Q8NH18 312 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 HIST1H2ACQ93077 130 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 HSH2DQ96JZ2 352 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 MUS81Q96NY9 551 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 AMBRA1Q9C0C7 1298 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 NANSQ9NR45 359 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 DCAF13Q9NV06 445 aaKnown RBP15.29■□□□□ 0.04
MDC1-206ENST00000489540 CD300AQ9UGN4 299 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 ZNF229Q9UJW7 825 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 SAMD4AQ9UPU9 718 aaKnown RBP15.29■□□□□ 0.04
MDC1-206ENST00000489540 NOX1Q9Y5S8 564 aa15.29■□□□□ 0.04
MDC1-206ENST00000489540 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 OR5H1A6NKK0 313 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 B2RBV5 119 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 LRRN3E7EW58 273 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 KPNA4O00629 521 aaPredicted RBP15.28■□□□□ 0.04
MDC1-206ENST00000489540 SIAH2O43255 324 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 AKAP8O43823 692 aaKnown RBP15.28■□□□□ 0.04
MDC1-206ENST00000489540 OR6A2O95222 327 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 MT-ND1P03886 318 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 TCN1P20061 433 aaPredicted RBP15.28■□□□□ 0.04
MDC1-206ENST00000489540 CALB2P22676 271 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 SELENOPP49908 381 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 STK11Q15831 433 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 FXNQ16595 210 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 C1QTNF12Q5T7M4 302 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 PXKQ7Z7A4 578 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 BCAS4Q8TDM0 211 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 TMEM239Q8WW34 195 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 FNDC11Q9BVV2 318 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 LINC00470Q9BZP3 86 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 PLEKHF2Q9H8W4 249 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 MAGEL2Q9UJ55 1249 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 A4GNTQ9UNA3 340 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 MED31Q9Y3C7 131 aa15.28■□□□□ 0.04
MDC1-206ENST00000489540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.27■□□□□ 0.04
MDC1-206ENST00000489540 SLC43A1O75387 559 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 RAD51DO75771 328 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 ZNF432O94892 652 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 ITGA5P08648 1049 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 AHCYP23526 432 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms