RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 CDH12P55289 794 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 FOXD4Q12950 439 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF672Q499Z4 452 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-230ENST00000489430 RABL3Q5HYI8 236 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 ARPINQ7Z6K5 226 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 OR6T1Q8NGN1 323 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 LILRB1Q8NHL6 650 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-230ENST00000489430 TAMM41Q96BW9 452 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 MPP4Q96JB8 637 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 WFDC6Q9BQY6 131 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 PRR14Q9BWN1 585 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 GRIP2Q9C0E4 1043 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 MOV10Q9HCE1 1003 aaKnown RBP16.7■□□□□ 0.26
MRPL55-230ENST00000489430 DLL4Q9NR61 685 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 B3GAT1Q9P2W7 334 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 BAG5Q9UL15 447 aa16.7■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF587BE7ETH6 402 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 M0R082 166 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 M0R3H8 397 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 CLOCKO15516 846 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 KRT33AO76009 404 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 MT-ATP6P00846 226 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 OPN1SWP03999 348 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 GRPRP30550 384 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 SH3BGRP55822 239 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 KRTAP1-3Q8IUG1 177 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF583Q96ND8 569 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 ASPNQ9BXN1 380 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 SLC19A3Q9BZV2 496 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 POLR2J2Q9GZM3 115 aaKnown RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 POLR2J3Q9H1A7 115 aaKnown RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 SLC17A5Q9NRA2 495 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 MRPL39Q9NYK5 338 aaKnown RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 NPAP1Q9NZP6 1156 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 VPS13CQ709C8 3753 aa16.69■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF469Q96JG9 3925 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-230ENST00000489430 TRAPPC13A5PLN9 417 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 RPL36A-HNRNPH2H7BZ11 118 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF432O94892 652 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 WNT11O96014 354 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 HOXB1P14653 301 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-230ENST00000489430 SELENOPP49908 381 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 PRPS1P60891 318 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 C1DQ13901 141 aaKnown RBP16.68■□□□□ 0.26
MRPL55-230ENST00000489430 NPTX1Q15818 432 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 ENTPD8Q5MY95 495 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 NIPAL3Q6P499 406 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 WDR31Q8NA23 367 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 WFDC11Q8NEX6 87 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 OR52N5Q8NH56 324 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 RNF217Q8TC41 542 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 MAGEE2Q8TD90 523 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-230ENST00000489430 ADAMTS16Q8TE57 1224 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 PROX1Q92786 737 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 FAIMQ9NVQ4 179 aa16.68■□□□□ 0.26
MRPL55-230ENST00000489430 RAI1Q7Z5J4 1906 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-230ENST00000489430 ROS1P08922 2347 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 FAM220BPB1ANY3 271 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 ABCD4O14678 606 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 BGLAPP02818 100 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 DANCRP0C864 163 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 CD40P25942 277 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 CRYBA2P53672 197 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-230ENST00000489430 CLDN17P56750 224 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 RIPPLY3P57055 190 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 RPS4XP62701 263 aaKnown RBP16.67■□□□□ 0.26
MRPL55-230ENST00000489430 Q5PR19 223 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 KLHL24Q6TFL4 600 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 SMAP2Q8WU79 429 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-230ENST00000489430 ZNF426Q9BUY5 554 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 NOX1Q9Y5S8 564 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 MTORP42345 2549 aa16.67■□□□□ 0.26
MRPL55-230ENST00000489430 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 OVOL3O00110 214 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 NDUFAB1O14561 156 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 SLC43A1O75387 559 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 NQO1P15559 274 aaKnown RBP16.66■□□□□ 0.26
MRPL55-230ENST00000489430 PTH2RP49190 550 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 SF3A3Q12874 501 aaKnown RBP eCLIP16.66■□□□□ 0.26
MRPL55-230ENST00000489430 PXKQ7Z7A4 578 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 UEVLDQ8IX04 471 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 DEPDC4Q8N2C3 294 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 KDM8Q8N371 416 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 PIK3C3Q8NEB9 887 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 OR2T12Q8NG77 320 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 HOPXQ9BPY8 73 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-230ENST00000489430 CISD1Q9NZ45 108 aaKnown RBP16.66■□□□□ 0.26
MRPL55-230ENST00000489430 ARMCX1Q9P291 453 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 LAMP3Q9UQV4 416 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 MED13LQ71F56 2210 aa16.66■□□□□ 0.26
MRPL55-230ENST00000489430 CPSF4LA6NMK7 179 aaKnown RBP16.65■□□□□ 0.26
MRPL55-230ENST00000489430 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
MRPL55-230ENST00000489430 TRAF3IP2O43734 574 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-230ENST00000489430 IGF2P01344 180 aa16.65■□□□□ 0.26
MRPL55-230ENST00000489430 LTBQ06643 244 aa16.65■□□□□ 0.26
MRPL55-230ENST00000489430 PUDPQ08623 228 aa16.65■□□□□ 0.26
MRPL55-230ENST00000489430 PMS2P3Q13401 168 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms