RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SVOPQ8N4V2 548 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 KLHL15Q96M94 604 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 AMBNQ9NP70 447 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 NRIP3Q9NQ35 241 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 CNOT2Q9NZN8 540 aaKnown RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 GRHPRQ9UBQ7 328 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 PSORS1C1Q9UIG5 152 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP11-211ENST00000489111 B3GALT5Q9Y2C3 310 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 CFAP54Q96N23 3096 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 A0A1W2PNR3 127 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 IRGMA1A4Y4 181 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 FAM183AA6NL82 134 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 NPIPA5E9PKD4 350 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 XKRYO14609 159 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 PMS2P2O95744 297 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 MT-ND2P03891 347 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 HPNP05981 417 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 TSPAN19P0C672 248 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 DBTP11182 482 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 PIPP12273 146 aaPredicted RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 HIST1H1CP16403 213 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 SHC1P29353 583 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 SDHAP31040 664 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 EIF2S3P41091 472 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 RPL5P46777 297 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 DIO1P49895 249 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 NR1H2P55055 460 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 UCNP55089 124 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 B3GALT5-AS1P59052 145 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 RPS7P62081 194 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 PPIAP62937 165 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 CSNK2A1P68400 391 aaPredicted RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 SLC35A2P78381 396 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 EFNB1P98172 346 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 LGALS3BPQ08380 585 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 ITGADQ13349 1161 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 KRR1Q13601 381 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 CRMP1Q14194 572 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 KLHL12Q53G59 568 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 EMC4Q5J8M3 183 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 NXNL2Q5VZ03 156 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 NIPAL3Q6P499 406 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 IGFL2Q6UWQ7 119 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 PRSS48Q7RTY5 328 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 TMEM251Q8N6I4 163 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 LRRC75AQ8NAA5 344 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 ADPRHL1Q8NDY3 354 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 SDR9C7Q8NEX9 313 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 OR52E2Q8NGJ4 325 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 OR4K13Q8NH42 304 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 SGCDQ92629 289 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 MIB2Q96AX9 1013 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 RASD2Q96D21 266 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 ZHX1-C8orf76Q96EF9 292 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 SMAD5Q99717 465 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 RHNO1Q9BSD3 238 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 DUSP21Q9H596 190 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 HINT3Q9NQE9 182 aaKnown RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 PAK1IP1Q9NWT1 392 aaPredicted RBP9.01□□□□□ -0.97
USP11-211ENST00000489111 QPCTLQ9NXS2 382 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 TAS2R5Q9NYW4 299 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 ERVK-18Q9QC07 812 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 SEC14L4Q9UDX3 406 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 NPIPA1Q9UND3 350 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 TRAPPC4Q9Y296 219 aa9.01□□□□□ -0.97
USP11-211ENST00000489111 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
USP11-211ENST00000489111 A0A1W2PNV4 684 aa9□□□□□ -0.97
USP11-211ENST00000489111 SLC22A31A6NKX4 558 aa9□□□□□ -0.97
USP11-211ENST00000489111 TRIM64CA6NLI5 447 aa9□□□□□ -0.97
USP11-211ENST00000489111 MKRN2OSH3BPM6 223 aa9□□□□□ -0.97
USP11-211ENST00000489111 SEC14L5O43304 696 aa9□□□□□ -0.97
USP11-211ENST00000489111 EIF1BO60739 113 aaKnown RBP9□□□□□ -0.97
USP11-211ENST00000489111 FZD7O75084 574 aa9□□□□□ -0.97
USP11-211ENST00000489111 GLSO94925 669 aaPredicted RBP9□□□□□ -0.97
USP11-211ENST00000489111 AKR7A3O95154 331 aa9□□□□□ -0.97
USP11-211ENST00000489111 FADS2O95864 444 aaKnown RBP9□□□□□ -0.97
USP11-211ENST00000489111 TXNDC12O95881 172 aa9□□□□□ -0.97
USP11-211ENST00000489111 PLGP00747 810 aaPredicted RBP9□□□□□ -0.97
USP11-211ENST00000489111 RENP00797 406 aa9□□□□□ -0.97
USP11-211ENST00000489111 CDK1P06493 297 aa9□□□□□ -0.97
USP11-211ENST00000489111 ADRB1P08588 477 aa9□□□□□ -0.97
USP11-211ENST00000489111 HTR1AP08908 422 aa9□□□□□ -0.97
USP11-211ENST00000489111 HTR1FP30939 366 aa9□□□□□ -0.97
USP11-211ENST00000489111 ATP6V1E1P36543 226 aa9□□□□□ -0.97
USP11-211ENST00000489111 MAGEA5P43359 124 aa9□□□□□ -0.97
USP11-211ENST00000489111 MTNR1AP48039 350 aa9□□□□□ -0.97
USP11-211ENST00000489111 SLC16A1P53985 500 aa9□□□□□ -0.97
USP11-211ENST00000489111 MVKQ03426 396 aa9□□□□□ -0.97
USP11-211ENST00000489111 PIGFQ07326 219 aa9□□□□□ -0.97
USP11-211ENST00000489111 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
USP11-211ENST00000489111 ST3GAL4Q11206 333 aa9□□□□□ -0.97
USP11-211ENST00000489111 C1DQ13901 141 aaKnown RBP9□□□□□ -0.97
USP11-211ENST00000489111 NEDD8Q15843 81 aa9□□□□□ -0.97
USP11-211ENST00000489111 ACKR1Q16570 336 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms