RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 HIST1H2ACQ93077 130 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 OTULINQ96BN8 352 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 TAS2R16Q9NYV7 291 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 EXOGQ9Y2C4 368 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 C2orf72A6NCS6 295 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 SLC22A31A6NKX4 558 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 VGLL3A8MV65 326 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 APEHP13798 732 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 PRKCAP17252 672 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 ITGA3P26006 1051 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 TGFBR2P37173 567 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 CASP3P42574 277 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 RPS5P46782 204 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 MAP2K6P52564 334 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 SPHARQ15513 63 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 ARMCX4Q5H9R4 360 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 OR5M10Q6IEU7 315 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 POMZP3Q6PJE2 187 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 NANOGNBQ7Z5D8 188 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 SLC37A3Q8NCC5 494 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 PSD4Q8NDX1 1056 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 BBS1Q8NFJ9 593 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 MOGAT1Q96PD6 335 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 MGLLQ99685 303 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 SMAD5Q99717 465 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 MED11Q9P086 117 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 LSM2Q9Y333 95 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 IER3IP1Q9Y5U9 82 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 ZNF462Q96JM2 2506 aa13.19□□□□□ -0.3
POLR2J3-204ENST00000486319 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 TMEM72A0PK05 275 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 BLOC1S5-TXNDC5H3BN57 136 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 ETV2O00321 342 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 IMPA2O14732 288 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 SLC22A1O15245 554 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 AHCYL1O43865 530 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 OR2T1O43869 369 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 NPIPB7O75200 414 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 BGLAPP02818 100 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 TSPAN19P0C672 248 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 ATP6V1E1P36543 226 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 LIPAP38571 399 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 SOX8P57073 446 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 MLF1P58340 268 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 LTBQ06643 244 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CRMP1Q14194 572 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CTF1Q16619 201 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 IL20RBQ6UXL0 311 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 MAMDC2Q7Z304 686 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 OR52E2Q8NGJ4 325 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 OR6S1Q8NH40 331 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 PTP4A1Q93096 173 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 OR5M11Q96RB7 305 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CLEC2DQ9UHP7 191 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CHCHD2Q9Y6H1 151 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 PCSK5Q92824 1860 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 AHSA1O95433 338 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CD14P08571 375 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 UQCRC1P31930 480 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 AQP2P41181 271 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 RGS6P49758 472 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 KLHL12Q53G59 568 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 SLC25A53Q5H9E4 307 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 C1orf140Q5VVS0 124 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 FCRLBQ6BAA4 426 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 TMEM156Q8N614 296 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 LRRC75AQ8NAA5 344 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 FAM98AQ8NCA5 519 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 KATNB1Q9BVA0 655 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 JAM3Q9BX67 310 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 PTGES2Q9H7Z7 377 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
POLR2J3-204ENST00000486319 CCRL2O00421 344 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 ZNF208O43345 1280 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 BCL10O95999 233 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 IGHA1P01876 353 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 SCG5P05408 212 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 SERPINA7P05543 415 aa13.17□□□□□ -0.3
POLR2J3-204ENST00000486319 HIST1H1CP16403 213 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms