RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 CMTM6Q9NX76 183 aa13.17□□□□□ -0.3
YIF1A-208ENST00000485820 NPAP1Q9NZP6 1156 aa13.17□□□□□ -0.3
YIF1A-208ENST00000485820 SLC25A15Q9Y619 301 aa13.17□□□□□ -0.3
YIF1A-208ENST00000485820 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
YIF1A-208ENST00000485820 CPSF4LA6NMK7 179 aaKnown RBP13.16□□□□□ -0.3
YIF1A-208ENST00000485820 FAM220BPB1ANY3 271 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 HS3ST1O14792 307 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 AIM2O14862 343 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 CHP2O43745 196 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 ZNF432O94892 652 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 CD3EP07766 207 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 DRD4P21917 467 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 MPGP29372 298 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 HOXC12P31275 282 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 LSP1P33241 339 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 KDELR2P33947 212 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 GYS2P54840 703 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 LGALS3BPQ08380 585 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 OR7E24Q6IFN5 339 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 OR52N5Q8NH56 324 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 BOD1Q96IK1 185 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 MOGAT1Q96PD6 335 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 EPYCQ99645 322 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 EFCAB1Q9HAE3 211 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
YIF1A-208ENST00000485820 SH3GLB1Q9Y371 365 aa13.16□□□□□ -0.3
YIF1A-208ENST00000485820 A0A1W2PR80 420 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 TRAPPC13A5PLN9 417 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 LRRN3E7EW58 273 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 SNX3O60493 162 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 UPK3AO75631 287 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 HPRP00739 348 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 ZNF43P17038 809 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 PTNP21246 168 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 GTF2E2P29084 291 aaKnown RBP13.15□□□□□ -0.3
YIF1A-208ENST00000485820 CLDN17P56750 224 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 MFSD13AQ14CX5 517 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 NIPAL3Q6P499 406 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 LINGO2Q7L985 606 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 CARM1Q86X55 608 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 MICU2Q8IYU8 434 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 ZNF611Q8N823 705 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 C1orf162Q8NEQ5 155 aaPredicted RBP13.15□□□□□ -0.3
YIF1A-208ENST00000485820 OR2T12Q8NG77 320 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
YIF1A-208ENST00000485820 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
YIF1A-208ENST00000485820 PRSS27Q9BQR3 290 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 ZNF426Q9BUY5 554 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
YIF1A-208ENST00000485820 BAG5Q9UL15 447 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 RNF115Q9Y4L5 304 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 CORINQ9Y5Q5 1042 aa13.15□□□□□ -0.3
YIF1A-208ENST00000485820 USF3Q68DE3 2245 aa13.15□□□□□ -0.31
YIF1A-208ENST00000485820 ELOVL7A1L3X0 281 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 IFNA14P01570 189 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 TNFRSF1BP20333 461 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 CYBRD1Q53TN4 286 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 HACD2Q6Y1H2 254 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 ARPINQ7Z6K5 226 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 SCAIQ8N9R8 606 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 PROX1Q92786 737 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 CCL19Q99731 98 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 SLC17A5Q9NRA2 495 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
YIF1A-208ENST00000485820 NME4O00746 187 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 PLPP3O14495 311 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 CLOCKO15516 846 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 HLA-DOBP13765 273 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 OR1E2P47887 323 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 SELENOWP63302 87 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 NKX6-1P78426 367 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 SLC25A3Q00325 362 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 LIPEQ05469 1076 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 PMS2P3Q13401 168 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 C1DQ13901 141 aaKnown RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 ZNF672Q499Z4 452 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 C1QTNF12Q5T7M4 302 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 ABHD12BQ7Z5M8 362 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-208ENST00000485820 CPLX4Q7Z7G2 160 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 LRRC75A-AS1Q8N1F1 130 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 MPP4Q96JB8 637 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 ASPNQ9BXN1 380 aa13.13□□□□□ -0.31
YIF1A-208ENST00000485820 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms