RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ELOVL6Q9H5J4 265 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 CYP3A43Q9HB55 503 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 GPATCH2LQ9NWQ4 482 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 DCDC2Q9UHG0 476 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 FLVCR1Q9Y5Y0 555 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 USP47Q96K76 1375 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 LRRK1Q38SD2 2015 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 RLFQ13129 1914 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 IGHV1OR21-1A0A087WYE8 117 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 IGHV7-81A0A0B4J1V7 117 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SIRPB1O00241 398 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 GOSR2O14653 212 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 TRDMT1O14717 391 aaKnown RBP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 EIF3HO15372 352 aaKnown RBP eCLIP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SPOPO43791 374 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 TSPAN13O95857 204 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 PLEKP08567 350 aaPredicted RBP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ABOP16442 354 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 PRKACAP17612 351 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 EIF2S2P20042 333 aaKnown RBP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 GTF2E2P29084 291 aaKnown RBP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 NTSP30990 170 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 NAA10P41227 235 aaPredicted RBP3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ETV1P50549 477 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SLC25A1P53007 311 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 CARD18P57730 90 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 FBXW4P57775 412 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 DNAJC3Q13217 504 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ILKQ13418 452 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ASAH1Q13510 395 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 OR2B11Q5JQS5 317 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 C22orf42Q6IC83 251 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 C11orf71Q6IPW1 123 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 CERS6Q6ZMG9 384 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SLC16A14Q7RTX9 510 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 RDH10Q8IZV5 341 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ACOT4Q8N9L9 421 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 ANKRD49Q8WVL7 239 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 PIBF1Q8WXW3 757 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 RASL10AQ92737 203 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 FGF11Q92914 225 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 C8orf44Q96CB5 159 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 GSDMAQ96QA5 445 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 OR8B4Q96RC9 309 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SH3GL1Q99961 368 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 VGLL1Q99990 258 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 APOL2Q9BQE5 337 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 TEKT3Q9BXF9 490 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 TRIM15Q9C019 465 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 SELENOIQ9C0D9 397 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 RGCCQ9H4X1 137 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 HOXC10Q9NYD6 342 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 AHSPQ9NZD4 102 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 KLK13Q9UKR3 277 aa3.45□□□□□ -1.86
VPS13A-211ENST00000484581 CDHR2Q9BYE9 1310 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 IGKV1D-8A0A087WSZ0 117 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 TRBV9A0A0B4J1U6 114 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 SMCO2A6NFE2 343 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 LRRIQ3A6PVS8 624 aaPredicted RBP3.44□□□□□ -1.86
VPS13A-211ENST00000484581 RAB29O14966 203 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 MBTPS2O43462 519 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 PI15O43692 258 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 KLK3P07288 261 aaPredicted RBP3.44□□□□□ -1.86
VPS13A-211ENST00000484581 ANXA5P08758 320 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 TBPP20226 339 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 GSTM3P21266 225 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 ZP3P21754 424 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 MSR1P21757 451 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 HMOX2P30519 316 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 UQCRFS1P47985 274 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 RFX3P48380 749 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 GPM6AP51674 278 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 CCNHP51946 323 aaPredicted RBP3.44□□□□□ -1.86
VPS13A-211ENST00000484581 ITIH4Q14624 930 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 LRRC36Q1X8D7 754 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 HSDL1Q3SXM5 330 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 NKAIN1Q4KMZ8 207 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 LY6G6FQ5SQ64 297 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 ZNF497Q6ZNH5 498 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 FRA10AC1Q70Z53 315 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 PLA2G4DQ86XP0 818 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 FNDC5Q8NAU1 212 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 MARCH1Q8TCQ1 289 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 CHCHD10Q8WYQ3 142 aaPredicted RBP3.44□□□□□ -1.86
VPS13A-211ENST00000484581 PKNOX2Q96KN3 472 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 HSFY1Q96LI6 401 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 ZNF599Q96NL3 588 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 TMEM165Q9HC07 324 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 LYRM4Q9HD34 91 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 CHRAC1Q9NRG0 131 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 PTTG3PQ9NZH4 202 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 RSPH14Q9UHP6 348 aa3.44□□□□□ -1.86
VPS13A-211ENST00000484581 UBQLN1Q9UMX0 589 aaKnown RBP3.44□□□□□ -1.86
VPS13A-211ENST00000484581 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
VPS13A-211ENST00000484581 TNIKQ9UKE5 1360 aa3.43□□□□□ -1.86
VPS13A-211ENST00000484581 IGLV8-61A0A075B6I0 122 aa3.43□□□□□ -1.86
VPS13A-211ENST00000484581 KBTBD11-OT1A0A1B0GTJ5 212 aa3.43□□□□□ -1.86
VPS13A-211ENST00000484581 A0A1B0GU03 582 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms