RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ARPC4-TTLL3A0A0A6YYG9 625 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 IGHV2OR16-5A0A0B4J2B6 119 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 RFXANKO14593 260 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 NPIPB7O75200 414 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 IGLV1-44P01699 117 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 ITGA2P17301 1181 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 CBLP22681 906 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 CRATP43155 626 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 CAPZA2P47755 286 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 ANXA11P50995 505 aaKnown RBP12.04□□□□□ -0.48
VARS-226ENST00000483275 BST1Q10588 318 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 EFNB3Q15768 340 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 OGFOD2Q6N063 350 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 MDP1Q86V88 176 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 ZNF440Q8IYI8 595 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 SLC38A5Q8WUX1 472 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 TMEM19Q96HH6 336 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 NARFLQ9H6Q4 476 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 NOX3Q9HBY0 568 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 DYNLRB1Q9NP97 96 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 OBP2BQ9NPH6 170 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 CRNNQ9UBG3 495 aaPredicted RBP12.04□□□□□ -0.48
VARS-226ENST00000483275 GPR45Q9Y5Y3 372 aa12.04□□□□□ -0.48
VARS-226ENST00000483275 OR6C65A6NJZ3 312 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 FTCDNL1E5RQL4 147 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 BIRC5O15392 142 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 LILRA1O75019 489 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 RGS9O75916 674 aaPredicted RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 AHSA1O95433 338 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 NUDT7P0C024 238 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 TFPTP0C1Z6 253 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 KITP10721 976 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 THBS2P35442 1172 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 DSTNP60981 165 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 COPZ1P61923 177 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 IL1RL1Q01638 556 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 EGR4Q05215 589 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 STX3Q13277 289 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 SNTB2Q13425 540 aaKnown RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 GSTA3Q16772 222 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 CEACAM16Q2WEN9 425 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 PHYHD1Q5SRE7 291 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 CARD17Q5XLA6 110 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 COMTD1Q86VU5 262 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 MAL2Q969L2 176 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 RSPO3Q9BXY4 272 aaPredicted RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 RAB1BQ9H0U4 201 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 GPR35Q9HC97 309 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 MYOZ1Q9NP98 299 aaPredicted RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 B3GAT1Q9P2W7 334 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 HAO1Q9UJM8 370 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 RASD1Q9Y272 281 aa12.03□□□□□ -0.48
VARS-226ENST00000483275 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
VARS-226ENST00000483275 DYSFO75923 2080 aa12.02□□□□□ -0.48
VARS-226ENST00000483275 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.48
VARS-226ENST00000483275 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 M0R082 166 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 PDE5AO76074 875 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 KRT75O95678 551 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 ADRA2AP08913 450 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 NPR2P20594 1047 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 SRP14P37108 136 aaKnown RBP12.02□□□□□ -0.49
VARS-226ENST00000483275 MAP2K6P52564 334 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 CRISP3P54108 245 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 ADRM1Q16186 407 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 NXNQ6DKJ4 435 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 CARM1Q86X55 608 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 ANKRD42Q8N9B4 389 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 OR4F15Q8NGB8 312 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 OR9I1Q8NGQ6 314 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 CKAP2Q8WWK9 683 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 ZNF587Q96SQ5 575 aaPredicted RBP12.02□□□□□ -0.49
VARS-226ENST00000483275 DOK1Q99704 481 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 CRLF2Q9HC73 371 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 NKIRAS1Q9NYS0 192 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 FZR1Q9UM11 496 aa12.02□□□□□ -0.49
VARS-226ENST00000483275 M0R3G1 203 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 TCF21O43680 179 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 SLC43A1O75387 559 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 ZNF432O94892 652 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 ANP32DO95626 131 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 HLA-HP01893 362 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 IFNGR1P15260 489 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 TCN1P20061 433 aaPredicted RBP12.01□□□□□ -0.49
VARS-226ENST00000483275 GIFP27352 417 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 HTR2AP28223 471 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms