RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 STARD4Q96DR4 205 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF587Q96SQ5 575 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-212ENST00000480461 TM9SF2Q99805 663 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 PSD2Q9BQI7 771 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ENKD1Q9H0I2 346 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ANKRD19PQ9H560 264 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 TAS2R5Q9NYW4 299 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 B3GAT1Q9P2W7 334 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 MCTS1Q9ULC4 181 aaKnown RBP10.88□□□□□ -0.67
TRA2B-212ENST00000480461 MED31Q9Y3C7 131 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 LYVE1Q9Y5Y7 322 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF469Q96JG9 3925 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ANKHD1Q8IWZ3 2542 aaKnown RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 A0A1W2PNV4 684 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 PLPP3O14495 311 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 KLF4O43474 513 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 DNPH1O43598 174 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 OR2T1O43869 369 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 EIF1BO60739 113 aaKnown RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ENTPD5O75356 428 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 CIB2O75838 187 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 OR7A10O76100 309 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 IL2RAP01589 272 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 TSPAN19P0C672 248 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 HLA-DOBP13765 273 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF26P17031 533 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 OMPP47874 163 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 RASGEF1BQ0VAM2 473 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 EXOC3L2Q2M3D2 409 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 FGD3Q5JSP0 725 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 OTUD3Q5T2D3 398 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ABLIM2Q6H8Q1 611 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF770Q6IQ21 691 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 VWA1Q6PCB0 445 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 C5orf46Q6UWT4 87 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF730Q6ZMV8 503 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 H1FNTQ75WM6 255 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 P4HA3Q7Z4N8 544 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 CDH24Q86UP0 819 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 RNF113BQ8IZP6 322 aaKnown RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF808Q8N4W9 903 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 C10orf53Q8N6V4 93 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 OR4K5Q8NGD3 323 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 POP5Q969H6 163 aaKnown RBP10.87□□□□□ -0.67
TRA2B-212ENST00000480461 BPIFA2Q96DR5 249 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 SGTBQ96EQ0 304 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 EPYCQ99645 322 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 TAPBPLQ9BX59 468 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 PRRG4Q9BZD6 226 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 UCK2Q9BZX2 261 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 ARMC1Q9NVT9 282 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 AP4S1Q9Y587 144 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 U3KQV3 271 aa10.87□□□□□ -0.67
TRA2B-212ENST00000480461 PHF3Q92576 2039 aaKnown RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 IGKV3D-15A0A087WSY6 115 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 TNFRSF11BO00300 401 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 SS18L1O75177 396 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 PTP4A3O75365 173 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 KRT36O76013 467 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 CST1P01037 141 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 IGF2P01344 180 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 YES1P07947 543 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 TMIGD3P0DMS9 266 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 IFI30P13284 250 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 CTSSP25774 331 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 SSTR2P30874 369 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 SLC16A1P53985 500 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 PDK3Q15120 406 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 ANKRD34AQ69YU3 496 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 HMBOX1Q6NT76 420 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 TMPRSS11FQ6ZWK6 438 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 MRGPRGQ86SM5 289 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 EPHX4Q8IUS5 362 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 HS3ST5Q8IZT8 346 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 SLC43A2Q8N370 569 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 RELL2Q8NC24 303 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 LILRB4Q8NHJ6 448 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 MOSPD2Q8NHP6 518 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 PYDC1Q8WXC3 89 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 SDCCAG3Q96C92 435 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 TNFRSF13CQ96RJ3 184 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 NAA11Q9BSU3 229 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
TRA2B-212ENST00000480461 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 MAGED1Q9Y5V3 778 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-212ENST00000480461 MED12LQ86YW9 2145 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 MPDZO75970 2070 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 LOC102725191A0A1B0GVB3 256 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 HSPB2A8KAH6 182 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 CLOCKO15516 846 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 MT-ATP6P00846 226 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 GASTP01350 101 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 PRKACGP22612 351 aa10.85□□□□□ -0.67
TRA2B-212ENST00000480461 AGTR1P30556 359 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms