RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SLC6A18Q96N87 628 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TEAD3Q99594 435 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 KATNB1Q9BVA0 655 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SLIRPQ9GZT3 109 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF160Q9HCG1 818 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 GALNT9Q9HCQ5 603 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LYRM4Q9HD34 91 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 C19orf53Q9UNZ5 99 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RIMS1Q86UR5 1692 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TRAV36DV7A0A075B6V5 113 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 HHLA1C9JL84 531 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 H7BYZ3 331 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC16A7O60669 478 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 GPX5O75715 221 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ITGB2P05107 769 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ENDOGQ14249 297 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CTF1Q16619 201 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 DEGS2Q6QHC5 323 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ADAMTSL4Q6UY14 1074 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LNX2Q8N448 690 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 OR4F15Q8NGB8 312 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MIB2Q96AX9 1013 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MSI2Q96DH6 328 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RBMXL1Q96E39 390 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC41A2Q96JW4 573 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LMF1Q96S06 567 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 GPR160Q9UJ42 338 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF443Q9Y2A4 671 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 B3GALT5Q9Y2C3 310 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TRBV5-4A0A0C4DH59 114 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 A0A1W2PPK0 400 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 A8MVM7 634 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 KNG1P01042 644 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 HEXBP07686 556 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MMP7P09237 267 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MMP11P24347 488 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MAOBP27338 520 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ELFN2Q5R3F8 820 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 KIAA0895LQ68EN5 471 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 PET117Q6UWS5 81 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 Q6ZTK2 550 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 GRAMD2AQ8IUY3 354 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CLRN3Q8NCR9 226 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 DUSP18Q8NEJ0 188 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 OR9K2Q8NGE7 335 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 GOT1L1Q8NHS2 421 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LINC01599Q8WXQ3 324 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ARHGAP9Q9BRR9 750 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MAN2C1Q9NTJ4 1040 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 POMT2Q9UKY4 750 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM184BQ9Y519 407 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 HRH3Q9Y5N1 445 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 MYH7BA7E2Y1 1941 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 A0A087WUU8 490 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TCRBV5S2A0A599 114 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SERINC4A6NH21 518 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CTNSO60931 367 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SORBS2O94875 1100 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SPP1P10451 314 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SFTPDP35247 375 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 OR1D4P47884 311 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CSNK1A1P48729 337 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 HTD2P86397 168 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 SEMG2Q02383 582 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RAB6CQ53S08 254 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LRRC73Q5JTD7 316 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM31Q5JXX7 168 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM184AQ6ZMB5 413 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CFAP77Q6ZQR2 320 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 FAM217AQ8IXS0 508 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RCBTB1Q8NDN9 531 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 OR51T1Q8NGJ9 327 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 OR5K2Q8NHB8 316 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 CYB5D2Q8WUJ1 264 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LRRC46Q96FV0 321 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 DDOQ99489 341 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RAB6CQ9H0N0 254 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 RRAGCQ9HB90 399 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 NCDNQ9UBB6 729 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF107Q9UII5 783 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 LSM5Q9Y4Y9 91 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 V9GYS6 101 aa5.71□□□□□ -1.5
PRPF4B-205ENST00000480058 A0A1B0GWA3 101 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 KDM4EB2RXH2 506 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CTSCP53634 463 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PDZK1IP1Q13113 114 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PDLIM3Q53GG5 364 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 AGBL4Q5VU57 503 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TCTN3Q6NUS6 607 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SPICQ8N5J4 248 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LINC01465Q8N7H1 131 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OR2AK2Q8NG84 335 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MOCOSQ96EN8 888 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CAPNS2Q96L46 248 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 WDR83Q9BRX9 315 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms