RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 B3GAT1Q9P2W7 334 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 PRPF19Q9UMS4 504 aaKnown RBP13.68□□□□□ -0.22
C9orf3-217ENST00000479161 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 PDZD2O15018 2839 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 POLQO75417 2590 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 MS4A18H0YCH9 400 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 M0R082 166 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF432O94892 652 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ADAP00813 363 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 LTBQ06643 244 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 PIN1Q13526 163 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF74Q16587 644 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 EXOC3L2Q2M3D2 409 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 MS4A18Q3C1V0 323 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 OR7E24Q6IFN5 339 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 NHLRC1Q6VVB1 395 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 DEF8Q6ZN54 512 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ABHD12BQ7Z5M8 362 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 VTCN1Q7Z7D3 282 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 CXorf67Q86X51 503 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 RNF113BQ8IZP6 322 aaKnown RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 C1orf162Q8NEQ5 155 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF417Q8TAU3 575 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 KISS1RQ969F8 398 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 DNAJA3Q96EY1 480 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF587Q96SQ5 575 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-217ENST00000479161 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 TAS2R16Q9NYV7 291 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 SNX13Q9Y5W8 968 aa13.67□□□□□ -0.22
C9orf3-217ENST00000479161 PLPP3O14495 311 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 AKAP8O43823 692 aaKnown RBP13.66□□□□□ -0.22
C9orf3-217ENST00000479161 PRSS23O95084 383 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF682O95780 498 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 TSPAN19P0C672 248 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ASAH2BP0C7U1 165 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 TNFRSF1BP20333 461 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 MXRA7P84157 204 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 PUDPQ08623 228 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ANKDD1AQ495B1 522 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 TIMM23BQ5SRD1 257 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 FKBP9P1Q75LS8 142 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 AAED1Q7RTV5 226 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF433Q8N7K0 673 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-217ENST00000479161 RNF217Q8TC41 542 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 TMEM239Q8WW34 195 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF775Q96BV0 537 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-217ENST00000479161 HSH2DQ96JZ2 352 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 LRR1Q96L50 414 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 LURAP1Q96LR2 239 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF385AQ96PM9 386 aaKnown RBP13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ACTR6Q9GZN1 396 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 NGBQ9NPG2 151 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-217ENST00000479161 NANSQ9NR45 359 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 EGFL7Q9UHF1 273 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 PRSS50Q9UI38 385 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 EDARQ9UNE0 448 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ENPP4Q9Y6X5 453 aa13.66□□□□□ -0.22
C9orf3-217ENST00000479161 ROS1P08922 2347 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 HRNRQ86YZ3 2850 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-217ENST00000479161 RPL36A-HNRNPH2H7BZ11 118 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 HRGP04196 525 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 ITGA2P17301 1181 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 RHCEP18577 417 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 IGHV1-2P23083 117 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 IL32P24001 234 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 EDNRAP25101 427 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 MPGP29372 298 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
C9orf3-217ENST00000479161 TRAM2Q15035 370 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 CASP12Q6UXS9 341 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 BHLHA15Q7RTS1 189 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-217ENST00000479161 CYP4Z1Q86W10 505 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 NKAIN4Q8IVV8 208 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 C17orf78Q8N4C9 275 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 PYURFQ96I23 114 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 NSMCE2Q96MF7 247 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 SLC7A10Q9NS82 523 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-217ENST00000479161 MED31Q9Y3C7 131 aa13.65□□□□□ -0.22
C9orf3-217ENST00000479161 CADP27708 2225 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 A0A1W2PRQ8 180 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NPIPB13A6NJU9 1138 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 DEFB108AA8MXU0 73 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NPIPB4C9JG80 1138 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 FFAR1O14842 300 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms