RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SOCS1O15524 211 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 TRIM16O95361 564 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 CMA1P23946 247 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 TNFSF9P41273 254 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 PRRX1P54821 245 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 RPS11P62280 158 aaKnown RBP eCLIP0.65□□□□□ -2.31
HPS3-205ENST00000478525 TNFRSF9Q07011 255 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 ERCC8Q13216 396 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 FZD2Q14332 565 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 PIGHQ14442 188 aaPredicted RBP0.65□□□□□ -2.31
HPS3-205ENST00000478525 MAPK6Q16659 721 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 THOC6Q86W42 341 aaKnown RBP0.65□□□□□ -2.31
HPS3-205ENST00000478525 EXOC6Q8TAG9 804 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 CMTM7Q96FZ5 175 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 SLC6A7Q99884 636 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 SLC35A5Q9BS91 424 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 SHANK2-AS3Q9BTD1 123 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 TMEM231Q9H6L2 316 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 GLRX2Q9NS18 164 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 ANO10Q9NW15 660 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 RDH8Q9NYR8 311 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 HMG20BQ9P0W2 317 aa0.65□□□□□ -2.31
HPS3-205ENST00000478525 PLXNB1O43157 2135 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 H3BNH8 94 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 HIP1O00291 1037 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 XKRYO14609 159 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 ALDOBP05062 364 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 LGALS2P05162 132 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 KLK3P07288 261 aaPredicted RBP0.64□□□□□ -2.31
HPS3-205ENST00000478525 CSF3P09919 207 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 C1GALT1C1LP0DN25 315 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 CALCRP30988 508 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 YWHABP31946 246 aaKnown RBP0.64□□□□□ -2.31
HPS3-205ENST00000478525 HSPA1LP34931 641 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 OPRK1P41145 380 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 SLC7A9P82251 487 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 HSDL2Q6YN16 418 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 ATP6V0D2Q8N8Y2 350 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 PTP4A1Q93096 173 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 ZNF382Q96SR6 550 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 RIOK2Q9BVS4 552 aaKnown RBP0.64□□□□□ -2.31
HPS3-205ENST00000478525 YY1AP1Q9H869 796 aa0.64□□□□□ -2.31
HPS3-205ENST00000478525 IGHV3OR16-8A0A075B7F1 116 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 XPO1O14980 1071 aaKnown RBP0.63□□□□□ -2.31
HPS3-205ENST00000478525 GKN3PP0CG01 181 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 TGFBR2P37173 567 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 NCBP2P52298 156 aaKnown RBP eCLIP0.63□□□□□ -2.31
HPS3-205ENST00000478525 HSD17B7P56937 341 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 ACVR1Q04771 509 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 ZBED5Q49AG3 693 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 LINC01620Q4KN68 170 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 FAM78AQ5JUQ0 283 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 HES5Q5TA89 166 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 TAF8Q7Z7C8 310 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 CNTN4Q8IWV2 1026 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 ACOT11Q8WXI4 607 aaPredicted RBP0.63□□□□□ -2.31
HPS3-205ENST00000478525 IL26Q9NPH9 171 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 KLHL28Q9NXS3 571 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 ATP6V1HQ9UI12 483 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 FRMPD4Q14CM0 1322 aa0.63□□□□□ -2.31
HPS3-205ENST00000478525 TRDCB7Z8K6 153 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 UBXN8O00124 270 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 GOSR1O95249 250 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 SLC25A14O95258 325 aaPredicted RBP0.62□□□□□ -2.31
HPS3-205ENST00000478525 HMOX1P09601 288 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 OR56A5P0C7T3 313 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 NAMPTP43490 491 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 GDI2P50395 445 aaKnown RBP0.62□□□□□ -2.31
HPS3-205ENST00000478525 ZNF235Q14590 738 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 MORF4L2Q15014 288 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 OR2G6Q5TZ20 316 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 H2AFVQ71UI9 128 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 ST20-AS1Q8NBB2 130 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 CCNYQ8ND76 341 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 OR5M1Q8NGP8 315 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 HPDLQ96IR7 371 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 SEC22AQ96IW7 307 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 TESK2Q96S53 571 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 LINC00597Q9H2U6 94 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 WDR76Q9H967 626 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 CYP39A1Q9NYL5 469 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 KCNN3Q9UGI6 736 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 FOXJ3Q9UPW0 622 aa0.62□□□□□ -2.31
HPS3-205ENST00000478525 G3V4G9 280 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 TIMM44O43615 452 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 VEGFDO43915 354 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 CXCL13O43927 109 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 FMO6PO60774 539 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 SMIM10L1P0DMW3 83 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 WARSP23381 471 aaKnown RBP0.61□□□□□ -2.31
HPS3-205ENST00000478525 PTGFRP43088 359 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 TNNT3P45378 269 aaPredicted RBP0.61□□□□□ -2.31
HPS3-205ENST00000478525 CYB561P49447 251 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 PRKCDQ05655 676 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 SAMD4BQ5PRF9 694 aaKnown RBP0.61□□□□□ -2.31
HPS3-205ENST00000478525 WDR88Q6ZMY6 472 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 ZNF546Q86UE3 836 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 BATF2Q8N1L9 274 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 STPG2Q8N412 459 aa0.61□□□□□ -2.31
HPS3-205ENST00000478525 TMCO5AQ8N6Q1 288 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms