RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 DMRTA2Q96SC8 542 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 BDH2Q9BUT1 245 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 RNF122Q9H9V4 155 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
SEC13-215ENST00000477547 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 A0A1B0GUH1 482 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 CYTIPO60759 359 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 PLGP00747 810 aaPredicted RBP13.66□□□□□ -0.22
SEC13-215ENST00000477547 HIST1H2ABP04908 130 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 ASAH2BP0C7U1 165 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 ZNF23P17027 643 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 OMPP47874 163 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 ELF3P78545 371 aaPredicted RBP13.66□□□□□ -0.22
SEC13-215ENST00000477547 H3F3AP84243 136 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 PMS2P3Q13401 168 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 RNPS1Q15287 305 aaKnown RBP13.66□□□□□ -0.22
SEC13-215ENST00000477547 MICAQ29983 383 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 OR2A2Q6IF42 318 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 PGBD2Q6P3X8 592 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 HIST3H2AQ7L7L0 130 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 TMEM179BQ7Z7N9 219 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 SLC43A2Q8N370 569 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 AQP11Q8NBQ7 271 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 GIPC3Q8TF64 312 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 HIST1H2ACQ93077 130 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 ZFP3Q96NJ6 502 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 PKP2Q99959 881 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 CLEC4AQ9UMR7 237 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 B3GALT5Q9Y2C3 310 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
SEC13-215ENST00000477547 TRAV27A0A087WT01 109 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 A0A1W2PNV4 684 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 ARRDC5A6NEK1 342 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 CDC42EP2O14613 210 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 CLDN1O95832 211 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 IL2RAP01589 272 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 FPR3P25089 353 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 TIMP3P35625 211 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 P2RY4P51582 365 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 PUDPQ08623 228 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 RASGEF1BQ0VAM2 473 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 PMPCAQ10713 525 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 RCN1Q15293 331 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 RIPPLY2Q5TAB7 128 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 TMEM211Q6ICI0 200 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 ZNF770Q6IQ21 691 aaPredicted RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 SHQ1Q6PI26 577 aaKnown RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 TMPRSS11FQ6ZWK6 438 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 H1FNTQ75WM6 255 aaPredicted RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 ZER1Q7Z7L7 766 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 GPAT4Q86UL3 456 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 PQLC1Q8N2U9 271 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 ICA1LQ8NDH6 482 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 OR5K1Q8NHB7 308 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 CENPNQ96H22 339 aaPredicted RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 PSD2Q9BQI7 771 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
SEC13-215ENST00000477547 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 RASD1Q9Y272 281 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 FREM1Q5H8C1 2179 aa13.65□□□□□ -0.22
SEC13-215ENST00000477547 CSMD1Q96PZ7 3565 aa13.65□□□□□ -0.23
SEC13-215ENST00000477547 SAC3D1A6NKF1 404 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 ZNF716A6NP11 495 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 LRRTM2O43300 516 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 KLF4O43474 513 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 TOXO94900 526 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 OR6A2O95222 327 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 ADORA3P0DMS8 318 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SLC9A3P48764 834 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 SIRPAP78324 504 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 RPL18Q07020 188 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 GTF2IRD2BQ6EKJ0 949 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 TMEM225Q6GV28 225 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 C1orf94Q6P1W5 598 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 MTFR2Q6P444 385 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 OAFQ86UD1 273 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GTF2IRD2Q86UP8 949 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 NAXEQ8NCW5 288 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 OR9K2Q8NGE7 335 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 FANK1Q8TC84 345 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GNPDA2Q8TDQ7 276 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 RND1Q92730 232 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 INTS12Q96CB8 462 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 CCDC120Q96HB5 630 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 EMC3Q9P0I2 261 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms