RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 TP53I3Q53FA7 332 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 EMC4Q5J8M3 183 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 FAM69BQ5VUD6 431 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 TMEM91Q6ZNR0 172 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 LYSMD2Q8IV50 215 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 LAX1Q8IWV1 398 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 RFLNBQ8N5W9 214 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 MINDY2Q8NBR6 621 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 HGDQ93099 445 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 MR1Q95460 341 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 MYOTQ9UBF9 498 aa13.94□□□□□ -0.18
RPUSD3-215ENST00000475470 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ISPDA4D126 451 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 FAM171A2A8MVW0 826 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ADAM10O14672 748 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 PLPP2O43688 288 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 SELENOFO60613 162 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TXNDC12O95881 172 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 MT-ATP6P00846 226 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 GAAP10253 952 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 CD53P19397 219 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 F8A1P23610 371 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 HTR3AP46098 478 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 SLC25A1P53007 311 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 MC2RQ01718 297 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TCEAL6Q6IPX3 200 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 PLEKHG7Q6ZR37 379 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 FAM83FQ8NEG4 500 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TCEAL3Q969E4 200 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 PMEPA1Q969W9 287 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TSPAN32Q96QS1 320 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ALG12Q9BV10 488 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ULBP3Q9BZM4 244 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 GALNT9Q9HCQ5 603 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 UGT2A1Q9Y4X1 527 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 FUOMA2VDF0 154 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 SP9P0CG40 484 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 MPLP40238 635 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TMED10P49755 219 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 CAV3P56539 151 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 E2F1Q01094 437 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 KRR1Q13601 381 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TRAM1Q15629 374 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 FAM69AQ5T7M9 428 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 C1orf140Q5VVS0 124 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 GPR139Q6DWJ6 353 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 RPTNQ6XPR3 784 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ZBTB44Q8NCP5 570 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 OR5J2Q8NH18 312 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ASB15Q8WXK1 588 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 TTC9Q92623 222 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 PTDSS2Q9BVG9 487 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ARRDC1-AS1Q9H2J1 176 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ABCB9Q9NP78 766 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 POLE4Q9NR33 117 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
RPUSD3-215ENST00000475470 ANKUB1A6NFN9 424 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 C11orf98E9PRG8 122 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 OR2J2O76002 312 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 GBX2P52951 348 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 SLC22A16Q86VW1 577 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 SYS1Q8N2H4 156 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 SLC22A8Q8TCC7 542 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 MRPL48Q96GC5 212 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 WDFY2Q96P53 400 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 TSSK2Q96PF2 358 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 DEFB126Q9BYW3 111 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 SRA1Q9HD15 236 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 TAS2R5Q9NYW4 299 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 ZNF346Q9UL40 294 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 MOKQ9UQ07 419 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 MUC3AQ02505 3323 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 C9J4A7 227 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 MAGEB4O15481 346 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 NPIPB7O75200 414 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 RENP00797 406 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 GP1BAP07359 652 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 TGM1P22735 817 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 AHCYP23526 432 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 ACVR1BP36896 505 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 LINC01590Q5TEZ4 76 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 STK35Q8TDR2 534 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 SLC39A1Q9NY26 324 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 MED11Q9P086 117 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 GRIP1Q9Y3R0 1128 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 WDR87Q6ZQQ6 2873 aa13.92□□□□□ -0.18
RPUSD3-215ENST00000475470 H7C1C5 153 aa13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 DVL2O14641 736 aa13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 AHSA1O95433 338 aa13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 CCKBRP32239 447 aa13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 SUMO3P55854 103 aaPredicted RBP13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 LCN6P62502 163 aa13.91□□□□□ -0.18
RPUSD3-215ENST00000475470 SGCBQ16585 318 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms