RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 APOOLQ6UXV4 268 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 BEX2Q9BXY8 128 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 POLR2J2Q9GZM3 115 aaKnown RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 POLR2J3Q9H1A7 115 aaKnown RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 NTNG1Q9Y2I2 539 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 TRBV4-1A0A0J9YWV2 114 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 B4DXG7 233 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 FMO6PO60774 539 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 HOXA1P49639 335 aaPredicted RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 CSNK2BP67870 215 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
LMNA-213ENST00000473598 SCN1BQ07699 218 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 TGIF1Q15583 401 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 DCST1Q5T197 706 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 TEX261Q6UWH6 196 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 PHC2Q8IXK0 858 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 ST8SIA4Q92187 359 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 FUZQ9BT04 418 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 P4HTMQ9NXG6 502 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 EMC3Q9P0I2 261 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 FBXL4Q9UKA2 621 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 FKBP7Q9Y680 259 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 U3KQ87 197 aa13.49□□□□□ -0.25
LMNA-213ENST00000473598 A0A1W2PQD3 144 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 OR2J2O76002 312 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ZP3P21754 424 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 GADD45AP24522 165 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 HTR2AP28223 471 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ACAA2P42765 397 aaKnown RBP13.48□□□□□ -0.25
LMNA-213ENST00000473598 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
LMNA-213ENST00000473598 ST3GAL3Q11203 375 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 CD226Q15762 336 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ZNF550Q7Z398 422 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 CDH26Q8IXH8 852 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 C9orf62Q8N4C0 152 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 AQP11Q8NBQ7 271 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ZNF540Q8NDQ6 660 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 FAM71CQ8NEG0 241 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 SLC7A13Q8TCU3 470 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 SIGLEC11Q96RL6 698 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 RHNO1Q9BSD3 238 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 PRRG3Q9BZD7 231 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 IL17BQ9UHF5 180 aa13.48□□□□□ -0.25
LMNA-213ENST00000473598 FAM20BO75063 409 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 CYP7B1O75881 506 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GASTP01350 101 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 MAB21L1Q13394 359 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 TRAM2Q15035 370 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 SEC23BQ15437 767 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 OR1Q1Q15612 314 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 SLC46A3Q7Z3Q1 461 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GDPD1Q8N9F7 314 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GATSQ8NAP1 163 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 POGLUT1Q8NBL1 392 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 PHOSPHO1Q8TCT1 267 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ADAMTS17Q8TE56 1095 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 UBASH3BQ8TF42 649 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GTPBP3Q969Y2 492 aaKnown RBP13.47□□□□□ -0.25
LMNA-213ENST00000473598 SLC41A3Q96GZ6 507 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 RASL10BQ96S79 203 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ZNF559Q9BR84 538 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ANKRD19PQ9H560 264 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 HRH3Q9Y5N1 445 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 DSPP15924 2871 aaKnown RBP13.47□□□□□ -0.25
LMNA-213ENST00000473598 MASP2O00187 686 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 FAAHO00519 579 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 FADS1O60427 444 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 THY1P04216 161 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 RRASP10301 218 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 POU2F1P14859 743 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 FBXW4P57775 412 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 FOXK2Q01167 660 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 Q0VFX4 171 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 QPRTQ15274 297 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GRK1Q15835 563 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 NDUFAF6Q330K2 333 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 KLHL12Q53G59 568 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 PODNL1Q6PEZ8 512 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ZNF440Q8IYI8 595 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 FGF11Q92914 225 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 HGDQ93099 445 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 ZNF416Q9BWM5 594 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 TBL1XR1Q9BZK7 514 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 RTN4RQ9BZR6 473 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 MMP28Q9H239 520 aa13.47□□□□□ -0.25
LMNA-213ENST00000473598 EXOSC3Q9NQT5 275 aaKnown RBP13.47□□□□□ -0.25
LMNA-213ENST00000473598 MAP1BP46821 2468 aaKnown RBP13.47□□□□□ -0.25
LMNA-213ENST00000473598 DOCK10Q96BY6 2186 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms