RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 RASA2Q15283 850 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 MOGQ16653 247 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 TSTQ16762 297 aaKnown RBP8.65□□□□□ -1.02
CDHR3-209ENST00000472116 GSG1Q2KHT4 349 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 ESCO2Q56NI9 601 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 TTMPQ5BVD1 217 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 PDZK1Q5T2W1 519 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 GPR157Q5UAW9 335 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 PRAMEF8Q5VWM4 474 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 PRAMEF7Q5VXH5 474 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 LRRN1Q6UXK5 716 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 Q6YL49 198 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 C1orf174Q8IYL3 243 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 OR10S1Q8NGN2 331 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 METTL6Q8TCB7 284 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 SSMEM1Q8WWF3 244 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 MS4A14Q96JA4 679 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 CCDC106Q9BWC9 280 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 NELFAQ9H3P2 528 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 PRDM13Q9H4Q3 707 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 ZCCHC3Q9NUD5 404 aaKnown RBP8.65□□□□□ -1.02
CDHR3-209ENST00000472116 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-209ENST00000472116 PCDHGB5Q9Y5G0 923 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 GPR137BO60478 399 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 UPK3AO75631 287 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 TGDSO95455 350 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 PPP1R3DO95685 299 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 RAB36O95755 333 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 HMGN2P05204 90 aaKnown RBP8.64□□□□□ -1.03
CDHR3-209ENST00000472116 C2P06681 752 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 GPIP06744 558 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 RBP1P09455 135 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 CD79AP11912 226 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 RYKP34925 604 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 HTR3AP46098 478 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 CDH13P55290 713 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 LCP2Q13094 533 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 IMPG1Q17R60 797 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 NOXRED1Q6NXP6 359 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 BRD3OSQ6XYD6 125 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 GDPGP1Q6ZNW5 385 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 EIF3MQ7L2H7 374 aaKnown RBP8.64□□□□□ -1.03
CDHR3-209ENST00000472116 GPR137CQ8N3F9 429 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 ZIC4Q8N9L1 334 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 OR4S1Q8NGB4 309 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 KIF18AQ8NI77 898 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 SYNPRQ8TBG9 265 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 UPRTQ96BW1 309 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 MARS2Q96GW9 593 aaKnown RBP8.64□□□□□ -1.03
CDHR3-209ENST00000472116 PBKQ96KB5 322 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 NANOGQ9H9S0 305 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 KIF17Q9P2E2 1029 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 FBXL3Q9UKT7 428 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 FAF1Q9UNN5 650 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-209ENST00000472116 CACNG2Q9Y698 323 aa8.64□□□□□ -1.03
CDHR3-209ENST00000472116 TMED7-TICAM2A0A0A6YYA0 188 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 TCRBV9S1A1TA0A576 114 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 FAM159BA6NKW6 160 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 E7ESA3 106 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF208O43345 1280 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 DNAJA2O60884 412 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 AKR7A3O95154 331 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 VAMP5O95183 116 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 MELTFP08582 738 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 RPS17P08708 135 aaKnown RBP8.63□□□□□ -1.03
CDHR3-209ENST00000472116 SBK2P0C263 348 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF35P13682 527 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 PAX8Q06710 450 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 TP53BP2Q13625 1128 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 PDE7AQ13946 482 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 HERPUD1Q15011 391 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 GPR68Q15743 365 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 FXNQ16595 210 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 ATP6AP1LQ52LC2 224 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 RPS27LQ71UM5 84 aaKnown RBP8.63□□□□□ -1.03
CDHR3-209ENST00000472116 TMEM99Q8N816 258 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 CIDECQ96AQ7 238 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-209ENST00000472116 PPCDCQ96CD2 204 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 TAPBPLQ9BX59 468 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 EGLN1Q9GZT9 426 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 PATZ1Q9HBE1 687 aaKnown RBP8.63□□□□□ -1.03
CDHR3-209ENST00000472116 NPHS2Q9NP85 383 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 LZTFL1Q9NQ48 299 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 SIRT5Q9NXA8 310 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 TMED7Q9Y3B3 224 aa8.63□□□□□ -1.03
CDHR3-209ENST00000472116 POLR3HQ9Y535 204 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF503-AS2A6NEH8 195 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 AQP7P3A6NL99 342 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 A8MXK9 166 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 NPIPB9F8W1W9 429 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 PPP6CO00743 305 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 SCN2BO60939 215 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 SLC43A1O75387 559 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 URI1O94763 535 aaPredicted RBP8.62□□□□□ -1.03
CDHR3-209ENST00000472116 IMPDH2P12268 514 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 CD80P33681 288 aa8.62□□□□□ -1.03
CDHR3-209ENST00000472116 SLC6A9P48067 706 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms