RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 IGKV6-21A0A0C4DH24 114 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 RBMY1BA6NDE4 496 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 RBMY1EA6NEQ0 496 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 F5H6K3 240 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 K7EPI3 171 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 M0QX08 132 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 CASQ2O14958 399 aaPredicted RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 ADCY5O95622 1261 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 PAHP00439 452 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 KLK3P07288 261 aaPredicted RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 RBMY1DP0C7P1 496 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 RBMY1A1P0DJD3 496 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 PNMTP11086 282 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 POU2F1P14859 743 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 LAP3P28838 519 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 BTCP35070 178 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 TFPI2P48307 235 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 EFNB2P52799 333 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 KLRC3Q07444 240 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 KIAA0087Q14695 138 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 SLC36A3Q495N2 470 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 CAVIN4Q5BKX8 364 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 GPR157Q5UAW9 335 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 OR52E8Q6IFG1 317 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 Q6ZN92 141 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 PGAP1Q75T13 922 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 ZDHHC21Q8IVQ6 265 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 C12orf56Q8IXR9 622 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 ZNF596Q8TC21 504 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 C17orf50Q8WW18 174 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 ITCHQ96J02 903 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 CEP170P1Q96L14 293 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 RBM14Q96PK6 669 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 MRPL45Q9BRJ2 306 aaKnown RBP3.06□□□□□ -1.92
XRN1-207ENST00000468894 SCRT1Q9BWW7 348 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 NT5C3AQ9H0P0 336 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 PDS5BQ9NTI5 1447 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 EXTL2Q9UBQ6 330 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 HPCAL4Q9UM19 191 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 MEMO1Q9Y316 297 aa3.06□□□□□ -1.92
XRN1-207ENST00000468894 LOC110117498-PIK3R3F6TDL0 507 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 AP3B1O00203 1094 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 XPO1O14980 1071 aaKnown RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 SMPD2O60906 423 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 E2F6O75461 281 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 PALMO75781 387 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TPM3P06753 285 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TSPY4P0CV99 314 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TSPY10P0CW01 314 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 PNMA6AP0CW24 399 aaPredicted RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 GCAP28676 217 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 NMUP48645 174 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 ARRB1P49407 418 aaPredicted RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 PPT1P50897 306 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 ACTA1P68133 377 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 ASPHQ12797 758 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 SLAQ13239 276 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 CYTH1Q15438 398 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 SLC15A2Q16348 729 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 MICBQ29980 383 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 LRRC10Q5BKY1 277 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TMEM255AQ5JRV8 349 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 CCDC183Q5T5S1 534 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 FRMPD2BQ6IN97 320 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 CCDC80Q76M96 950 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 DTX3LQ8TDB6 740 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TMEM246Q9BRR3 403 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 TPPP3Q9BW30 176 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 GPR61Q9BZJ8 451 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 CDC42EP4Q9H3Q1 356 aaKnown RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 ZNF282Q9UDV7 671 aaPredicted RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 PTBP2Q9UKA9 531 aaKnown RBP3.05□□□□□ -1.92
XRN1-207ENST00000468894 SLC25A15Q9Y619 301 aa3.05□□□□□ -1.92
XRN1-207ENST00000468894 PTCH1Q13635 1447 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 ARPC4-TTLL3A0A0A6YYG9 625 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 H0YC42 278 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 RGS16O15492 202 aaPredicted RBP3.04□□□□□ -1.92
XRN1-207ENST00000468894 NEMFO60524 1076 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 SS18L1O75177 396 aaPredicted RBP3.04□□□□□ -1.92
XRN1-207ENST00000468894 AP2A1O95782 977 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 KRT8P05787 483 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 ATP6V1C1P21283 382 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 CD9P21926 228 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 PCMT1P22061 227 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 PMELP40967 661 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 ACAA2P42765 397 aaKnown RBP3.04□□□□□ -1.92
XRN1-207ENST00000468894 ATP5OP48047 213 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 CCNA1P78396 465 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 BEX3Q00994 111 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 TNFRSF17Q02223 184 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 REG3AQ06141 175 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 VGLL4Q14135 290 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 MESDQ14696 234 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 CEP55Q53EZ4 464 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 TTC23Q5W5X9 447 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 ZNF561Q8N587 486 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 OR52K2Q8NGK3 314 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 STARD8Q92502 1023 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 SHC3Q92529 594 aa3.04□□□□□ -1.92
XRN1-207ENST00000468894 C16orf45Q96MC5 204 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms