RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 GRAMD2AQ8IUY3 354 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 OR4K14Q8NGD5 310 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 RNF139Q8WU17 664 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 FCGR1BQ92637 280 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 WFIKKN1Q96NZ8 548 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 KLF6Q99612 283 aaPredicted RBP1.05□□□□□ -2.24
SSB-208ENST00000468600 DHX33Q9H6R0 707 aaKnown RBP1.05□□□□□ -2.24
SSB-208ENST00000468600 WDR76Q9H967 626 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 ROPN1Q9HAT0 212 aaPredicted RBP1.05□□□□□ -2.24
SSB-208ENST00000468600 SYTL2Q9HCH5 934 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 DUX4Q9UBX2 424 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 STAP1Q9ULZ2 295 aa1.05□□□□□ -2.24
SSB-208ENST00000468600 GPATCH8Q9UKJ3 1502 aaKnown RBP1.05□□□□□ -2.24
SSB-208ENST00000468600 FAM230AA0A1W2PPH8 454 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 TMEM223A0PJW6 202 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 TRDCB7Z8K6 153 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 C12orf77C9JDV5 145 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 TOM1L1O75674 476 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 TRIM16O95361 564 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 IL4P05112 153 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 COX5AP20674 150 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 CNR1P21554 472 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 SFNP31947 248 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 NAPAP54920 295 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 FGF8P55075 233 aaPredicted RBP1.04□□□□□ -2.24
SSB-208ENST00000468600 SLC26A5P58743 744 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 RAP1AP62834 184 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 EWSR1Q01844 656 aaKnown RBP eCLIP1.04□□□□□ -2.24
SSB-208ENST00000468600 MICBQ29980 383 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 TTLL9Q3SXZ7 439 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 Q6ZN92 141 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 LINC00336Q6ZUF6 198 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 CCDC91Q7Z6B0 441 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 SLC26A11Q86WA9 606 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 RIMKLAQ8IXN7 391 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 DHRSXQ8N5I4 330 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 CATSPER1Q8NEC5 780 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 OR5L2Q8NGL0 311 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 FGF11Q92914 225 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 L3HYPDHQ96EM0 354 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 C12orf66Q96MD2 445 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 VPS35Q96QK1 796 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 ZNF717Q9BY31 904 aaPredicted RBP1.04□□□□□ -2.24
SSB-208ENST00000468600 LHX5Q9H2C1 402 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 HMG20AQ9NP66 347 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 SLCO1B3Q9NPD5 702 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 WDR62O43379 1518 aa1.04□□□□□ -2.24
SSB-208ENST00000468600 A0A1W2PRQ8 180 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 LOC110117498-PIK3R3F6TDL0 507 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 HIP1O00291 1037 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 FOXE1O00358 373 aaPredicted RBP1.03□□□□□ -2.24
SSB-208ENST00000468600 CHST1O43916 411 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 CA3P07451 260 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 POLR2EP19388 210 aaKnown RBP1.03□□□□□ -2.24
SSB-208ENST00000468600 AP3M2P53677 418 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 ZNF616Q08AN1 781 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 NIPAL3Q6P499 406 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 TRIM69Q86WT6 500 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 KRT35Q92764 455 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 CABS1Q96KC9 395 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 CCT7Q99832 543 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 C12orf10Q9HB07 376 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 YAE1D1Q9NRH1 226 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 RASD1Q9Y272 281 aa1.03□□□□□ -2.24
SSB-208ENST00000468600 SEC16AO15027 2179 aa1.03□□□□□ -2.25
SSB-208ENST00000468600 G3V4G9 280 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 DNASE2O00115 360 aaPredicted RBP1.02□□□□□ -2.25
SSB-208ENST00000468600 CLDN5O00501 218 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 UGT1A9O60656 530 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 IGHG4P01861 327 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 GLAP06280 429 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 PSMA2P25787 234 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 PTGFRP43088 359 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 PITPNAQ00169 270 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 FLI1Q01543 452 aaPredicted RBP1.02□□□□□ -2.25
SSB-208ENST00000468600 TNFRSF17Q02223 184 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 FZD2Q14332 565 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 SAMD4BQ5PRF9 694 aaKnown RBP1.02□□□□□ -2.25
SSB-208ENST00000468600 OR2G6Q5TZ20 316 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 TNS2Q63HR2 1409 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 TMEM225Q6GV28 225 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 LCN12Q6JVE5 192 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 VN1R2Q8NFZ6 395 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 PHOSPHO2Q8TCD6 241 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 RTN4IP1Q8WWV3 396 aaPredicted RBP1.02□□□□□ -2.25
SSB-208ENST00000468600 CMTM7Q96FZ5 175 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 NARS2Q96I59 477 aaKnown RBP1.02□□□□□ -2.25
SSB-208ENST00000468600 NIPSNAP3BQ9BS92 247 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 CAPS2Q9BXY5 557 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 XCL2Q9UBD3 114 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 B9D1Q9UPM9 204 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 NUDCQ9Y266 331 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 GSTK1Q9Y2Q3 226 aa1.02□□□□□ -2.25
SSB-208ENST00000468600 NSG1A0A0A6YYJ2 146 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 RBMY1BA6NDE4 496 aaKnown RBP1.01□□□□□ -2.25
SSB-208ENST00000468600 RBMY1EA6NEQ0 496 aaKnown RBP1.01□□□□□ -2.25
SSB-208ENST00000468600 SGK1O00141 431 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 SDHDO14521 159 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 CTAGE5O15320 804 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 RBMY1DP0C7P1 496 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms