RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SPACA1Q9HBV2 294 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ASH2LQ9UBL3 628 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 PCDHGB6Q9Y5F9 930 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 PCDHGB1Q9Y5G3 927 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 A0A0G2JMM0 328 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 A0A1W2PPB8 328 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 A0A1W2PRS3 328 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 KIR3DP1A8MWS1 328 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 NDUFS6O75380 124 aaKnown RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 BGLAPP02818 100 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PNMTP11086 282 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CD82P27701 267 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 RPL5P46777 297 aaKnown RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PCYT1AP49585 367 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 MLLT10P55197 1068 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OCLNQ16625 522 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PGGHGQ32M88 737 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 GXYLT1Q4G148 440 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SYT14P1Q58G82 188 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SLC27A4Q6P1M0 643 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SIRT6Q8N6T7 355 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TCEANCQ8N8B7 351 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OSTF1Q92882 214 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TSSK6Q9BXA6 273 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 AMBNQ9NP70 447 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 GPR83Q9NYM4 423 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TVP23BQ9NYZ1 205 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 KLHL9Q9P2J3 617 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SEC14L4Q9UDX3 406 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 EFCAB9A8MZ26 197 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SHISA8B8ZZ34 492 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SLC25A17O43808 307 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CDC40O60508 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OR7A10O76100 309 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 JUNBP17275 347 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PTBP1P26599 531 aaKnown RBP eCLIP7.47□□□□□ -1.211e-7■■■■■ 45.2
BRCA1-208ENST00000468300 UQCRC1P31930 480 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SSR4P51571 173 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SMSP52788 366 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CDC42P60953 191 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 EMX1Q04741 257 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SNTA1Q13424 505 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TOP3AQ13472 1001 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PLPPR5Q32ZL2 321 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 DCAF10Q5QP82 559 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SMARCD3Q6STE5 483 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PTCHD4Q6ZW05 846 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 KCTD8Q6ZWB6 473 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 RRM2BQ7LG56 351 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 LNX2Q8N448 690 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OR51A7Q8NH64 312 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TRUB1Q8WWH5 349 aaKnown RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF582Q96NG8 517 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 DDOQ99489 341 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 HCAR1Q9BXC0 346 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 MED17Q9NVC6 651 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CHRNA9Q9UGM1 479 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 A0A087WXM4 84 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CLCA1A8K7I4 914 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PTGES3LE9PB15 166 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 FZD7O75084 574 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 CH25HO95992 272 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ICAM2P13598 275 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 PGCP20142 388 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 C21orf33P30042 268 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 SUMO3P55854 103 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-208ENST00000468300 COPZ1P61923 177 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 IRF3Q14653 427 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 RTP5Q14D33 572 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM44Q2T9K0 475 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ZBED5Q49AG3 693 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OR8H3Q8N146 312 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF248Q8NDW4 579 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 OR6S1Q8NH40 331 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF563Q8TA94 476 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM163Q8TC26 289 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 WASF3Q9UPY6 502 aa7.47□□□□□ -1.21
BRCA1-208ENST00000468300 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 KDM4EB2RXH2 506 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 MCIDASD6RGH6 385 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 TLX2O43763 284 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 IDH3BO43837 385 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 TRIM3O75382 744 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 QDPRP09417 244 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 CD46P15529 392 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ITPKBP27987 946 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 NUP62P37198 522 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 NR1H2P55055 460 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ACER2Q5QJU3 275 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 PRAMEF20Q5VT98 475 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 GRINAQ7Z429 371 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 BEST3Q8N1M1 668 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 BBS1Q8NFJ9 593 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ELOA3Q8NG57 546 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 OR8J1Q8NGP2 316 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms