RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ROBO4Q8WZ75 1007 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 DNAJA3Q96EY1 480 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 GMPPAQ96IJ6 420 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PRRG4Q9BZD6 226 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 DCLRE1BQ9H816 532 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 NBASA2RRP1 2371 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 HIVEP3Q5T1R4 2406 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF462Q96JM2 2506 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 INTS1Q8N201 2190 aaKnown RBP13.54□□□□□ -0.24
NPHP4-205ENST00000466897 IGHV3-15A0A0B4J1V0 119 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF724A8MTY0 619 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 KDM4EB2RXH2 506 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-205ENST00000466897 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 G3V2T6 193 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 H0YHG0 523 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 GPR171O14626 319 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 SS18L1O75177 396 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-205ENST00000466897 TOXO94900 526 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 IL2RAP01589 272 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF23P17027 643 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 GSTM3P21266 225 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 PRPS1P60891 318 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 COX10Q12887 443 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 FHL1Q13642 323 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 RCN1Q15293 331 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 TAF11Q15544 211 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 TMEM225Q6GV28 225 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 FAHD1Q6P587 224 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 RPRMLQ8N4K4 120 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 MARVELD2Q8N4S9 558 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 LRRC17Q8N6Y2 441 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ABHD3Q8WU67 409 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 FEVQ99581 238 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 GPA33Q99795 319 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 TAS2R5Q9NYW4 299 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 EMC3Q9P0I2 261 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 KLHL13Q9P2N7 655 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 B3GAT1Q9P2W7 334 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 STX18Q9P2W9 335 aaKnown RBP13.54□□□□□ -0.24
NPHP4-205ENST00000466897 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 ING1Q9UK53 422 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-205ENST00000466897 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
NPHP4-205ENST00000466897 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 MS4A18H0YCH9 400 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 CCL21O00585 134 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 RAMP1O60894 148 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 PTP4A3O75365 173 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 OR6A2O95222 327 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 IL18BPO95998 194 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 GASTP01350 101 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 ANPEPP15144 967 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 KLK2P20151 261 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 RIPK1Q13546 671 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 HSPB2Q16082 182 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 MS4A18Q3C1V0 323 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 CCDC103Q8IW40 242 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 MCEMP1Q8IX19 187 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 OR13C2Q8NGS9 318 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 RND1Q92730 232 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 SDCCAG3Q96C92 435 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 GPX7Q96SL4 187 aaPredicted RBP13.53□□□□□ -0.24
NPHP4-205ENST00000466897 NDEL1Q9GZM8 345 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 SEMA6AQ9H2E6 1030 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 OAZ3Q9UMX2 235 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 NOX1Q9Y5S8 564 aa13.53□□□□□ -0.24
NPHP4-205ENST00000466897 MYO7BQ6PIF6 2116 aa13.52□□□□□ -0.24
NPHP4-205ENST00000466897 MGRN1O60291 552 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 YES1P07947 543 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 ADORA3P0DMS8 318 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.25
NPHP4-205ENST00000466897 PMPCAQ10713 525 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 PLXDC2Q6UX71 529 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 NHLRC1Q6VVB1 395 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF620Q6ZNG0 422 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 RASSF6Q6ZTQ3 369 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 FAM214BQ7L5A3 538 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 HS3ST5Q8IZT8 346 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 TMEM45BQ96B21 275 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 NIPSNAP1Q9BPW8 284 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 SFXN3Q9BWM7 321 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF556Q9HAH1 456 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 MCCC2Q9HCC0 563 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF629Q9UEG4 869 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms