RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CD1EP15812 388 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 CASP14P31944 242 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 RDXP35241 583 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 WNT4P56705 351 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZYG11AQ6WRX3 759 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 Q6ZN92 141 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 LRRC74BQ6ZQY2 392 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 PAQR7Q86WK9 346 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 TGIF2LYQ8IUE0 185 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 CDH26Q8IXH8 852 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 CEP112Q8N8E3 955 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR6C4Q8NGE1 309 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR56B2PQ8NGI1 322 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 AKR7LQ8NHP1 331 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 NEIL3Q8TAT5 605 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 ACOT11Q8WXI4 607 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 PKNOX2Q96KN3 472 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 PLEKHF1Q96S99 279 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 FMO2Q99518 471 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 FAIM2Q9BWQ8 316 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 KCNIP3Q9Y2W7 256 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 LRRK1Q38SD2 2015 aa3.05□□□□□ -1.92
CDC42BPA-211ENST00000466538 FAM231BA6NCW3 169 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 CIB2O75838 187 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR7A10O76100 309 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 ACTL6AO96019 429 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 MMP1P03956 469 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 KITLGP21583 273 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 HTR1EP28566 365 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 CD1BP29016 333 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 NUP107P57740 925 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 GNB2P62879 340 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 C11orf53Q8IXP5 236 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 PNKDQ8N490 385 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR2L3Q8NG85 312 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR4F6Q8NGB9 312 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR1L6Q8NGR2 347 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 FGF14Q92915 247 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 RASD2Q96D21 266 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 PLEKHA8Q96JA3 519 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 CNDP1Q96KN2 507 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 TSG101Q99816 390 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 CCDC77Q9BR77 488 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 LY9Q9HBG7 655 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZFP14Q9HCL3 533 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 MRPL47Q9HD33 250 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 NMRK1Q9NWW6 199 aa3.04□□□□□ -1.92
CDC42BPA-211ENST00000466538 A0A1W2PPV9 198 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 FAM47DPA6NHR8 397 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 USP27XA6NNY8 438 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF716A6NP11 495 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 E9PBE3 544 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 WBP4O75554 376 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 UPK3AO75631 287 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 TMEM50AO95807 157 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 CRYGBP07316 175 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF735P0CB33 412 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ICAM2P13598 275 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ABOP16442 354 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ZNF19P17023 458 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 FUT3P21217 361 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 IFNA8P32881 189 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 GSSP48637 474 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 TPMTP51580 245 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 SUCLG1P53597 346 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ARHGAP19Q14CB8 494 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 HERPUD1Q15011 391 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 PPP1R7Q15435 360 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 NRF1Q16656 503 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 UQCC3Q6UW78 93 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 RNF165Q6ZSG1 346 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 SLC25A48Q6ZT89 311 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 FAM228AQ86W67 206 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 PIANPQ8IYJ0 282 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ACOT4Q8N9L9 421 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 FAM110BQ8TC76 370 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 RNF139Q8WU17 664 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 C12orf42Q96LP6 360 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 PANX2Q96RD6 677 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 SH3GL1Q99961 368 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 TMEM246Q9BRR3 403 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 OR11A1Q9GZK7 315 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 ROGDIQ9GZN7 287 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 EXD2Q9NVH0 621 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 KLHL28Q9NXS3 571 aa3.03□□□□□ -1.92
CDC42BPA-211ENST00000466538 CDHR2Q9BYE9 1310 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 HEATR9A2RTY3 570 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 GOLGA8OA6NCC3 632 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 CYSRT1A8MQ03 144 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 C12orf71A8MTZ7 269 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 GOLGA8NF8WBI6 632 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 MGRN1O60291 552 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 ERLIN2O94905 339 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 IGHV2-5P01817 119 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 C2P06681 752 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms