RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RHCGQ9UBD6 479 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 PRSS50Q9UI38 385 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 ZNF229Q9UJW7 825 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 FBN2P35556 2912 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 ENO4A6NNW6 628 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 ACOT8O14734 319 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 CH25HO95992 272 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 HPRP00739 348 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 ASAH2BP0C7U1 165 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 RHCEP18577 417 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 PSMB1P20618 241 aaKnown RBP17.98■□□□□ 0.47
SKA3-205ENST00000465471 TRAM2Q15035 370 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 EXOC3L2Q2M3D2 409 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 NHLRC1Q6VVB1 395 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 CYP2R1Q6VVX0 501 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.98■□□□□ 0.47
SKA3-205ENST00000465471 CYP4Z1Q86W10 505 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 OR5J2Q8NH18 312 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 APH1AQ96BI3 265 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 DHRS1Q96LJ7 313 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 KLHL4Q9C0H6 718 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 NMNAT1Q9HAN9 279 aaPredicted RBP17.98■□□□□ 0.47
SKA3-205ENST00000465471 C20orf141Q9NUB4 165 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 PARPBPQ9NWS1 579 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 CRIM1Q9NZV1 1036 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 C6orf203Q9P0P8 240 aaPredicted RBP17.98■□□□□ 0.47
SKA3-205ENST00000465471 MALT1Q9UDY8 824 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 V9GYQ6 96 aa17.98■□□□□ 0.47
SKA3-205ENST00000465471 A0A1W2PRQ8 180 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 TUBAL3A6NHL2 446 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 C16orf97H3BN30 126 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 PLPP3O14495 311 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 TRAF3IP2O43734 574 aaPredicted RBP17.97■□□□□ 0.47
SKA3-205ENST00000465471 MRPL33O75394 65 aaKnown RBP17.97■□□□□ 0.47
SKA3-205ENST00000465471 COX5AP20674 150 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 KIR2DL3P43628 341 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 LSM11P83369 360 aaKnown RBP eCLIP17.97■□□□□ 0.47
SKA3-205ENST00000465471 PUDPQ08623 228 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 DGCR6Q14129 220 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 DHFR2Q86XF0 187 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 ZNF100Q8IYN0 542 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 KDM8Q8N371 416 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 FAM222BQ8WU58 562 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 CCDC124Q96CT7 223 aaKnown RBP17.97■□□□□ 0.47
SKA3-205ENST00000465471 C14orf79Q96F83 325 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 OR10A4Q9H209 315 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 IL1RAPQ9NPH3 570 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 NANSQ9NR45 359 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 MED31Q9Y3C7 131 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 TESMINQ9Y4I5 508 aa17.97■□□□□ 0.47
SKA3-205ENST00000465471 ITPR2Q14571 2701 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 HTR3EA5X5Y0 456 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 hCG_2039718K7EN88 272 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 PIP5K1CO60331 668 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 DNAJC8O75937 253 aaPredicted RBP17.96■□□□□ 0.47
SKA3-205ENST00000465471 ATP5HO75947 161 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 TSPAN19P0C672 248 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 PRF1P14222 555 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 MAGEA2P43356 314 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 TRAP1Q12931 704 aaKnown RBP17.96■□□□□ 0.47
SKA3-205ENST00000465471 PMS2P3Q13401 168 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 P2RY6Q15077 328 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 FBXW9Q5XUX1 488 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 CASP12Q6UXS9 341 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 CXorf67Q86X51 503 aaPredicted RBP17.96■□□□□ 0.47
SKA3-205ENST00000465471 C10orf53Q8N6V4 93 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 LRRC17Q8N6Y2 441 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 LINC01560Q8TB33 94 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 ACOT11Q8WXI4 607 aaPredicted RBP17.96■□□□□ 0.47
SKA3-205ENST00000465471 SGTBQ96EQ0 304 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 DACH2Q96NX9 599 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 PIP5K1AQ99755 562 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 CADM1Q9BY67 442 aaKnown RBP17.96■□□□□ 0.47
SKA3-205ENST00000465471 RCE1Q9Y256 329 aa17.96■□□□□ 0.47
SKA3-205ENST00000465471 A0A087WUU8 490 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 PDLIM1O00151 329 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 OR7A10O76100 309 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 ZNF432O94892 652 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 ADAP00813 363 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 H1F0P07305 194 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 NQO1P15559 274 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 ZNF43P17038 809 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 ITGA2P17301 1181 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 ZP4Q12836 540 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 SFRP5Q5T4F7 317 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 AAED1Q7RTV5 226 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 PIWIL3Q7Z3Z3 882 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 PXKQ7Z7A4 578 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 RNF113BQ8IZP6 322 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 SLC7A13Q8TCU3 470 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 POP5Q969H6 163 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 FUZQ9BT04 418 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 TAS2R5Q9NYW4 299 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 GPR52Q9Y2T5 361 aa17.95■□□□□ 0.46
SKA3-205ENST00000465471 FAM32AQ9Y421 112 aaKnown RBP17.95■□□□□ 0.46
SKA3-205ENST00000465471 APCP25054 2843 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 GSC2O15499 205 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 DIRAS1O95057 198 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms