RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GRB2P62993 217 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 IKZF1Q13422 519 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM31Q5JXX7 168 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF648Q5T619 568 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 MEPCEQ7L2J0 689 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CPNE4Q96A23 557 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 KIRREL1Q96J84 757 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RNF39Q9H2S5 420 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 KCNK12Q9HB15 430 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 NTN4Q9HB63 628 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CACNG4Q9UBN1 327 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF230Q9UIE0 474 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RNF150Q9ULK6 438 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 MRPS2Q9Y399 296 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 IER3IP1Q9Y5U9 82 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 KDM4FA0A1W2PPD8 638 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 A0A1W2PQ09 198 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ARPC1BO15143 372 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 GLCEO94923 617 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TIMP1P01033 207 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CSF2RAP15509 400 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 SEC61A1P61619 476 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RAB33AQ14088 237 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RTL8BQ17RB0 113 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM184AQ6ZMB5 413 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 HIST2H3AQ71DI3 136 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 KANSL1Q7Z3B3 1105 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 AGBL5Q8NDL9 886 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 NLGN4YQ8NFZ3 816 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RHOXF1Q8NHV9 184 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 PHOSPHO2Q8TCD6 241 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 NTMT1Q9BV86 223 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ZCCHC4Q9H5U6 513 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 MRPL15Q9P015 296 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 NLKQ9UBE8 527 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 RIMS3Q9UJD0 308 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 FANCMQ8IYD8 2048 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM269A0A1B0GVZ9 245 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 DFFBO76075 338 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 OPRD1P41143 372 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 HTR5AP47898 357 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 PSMB3P49720 205 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CRMP1Q14194 572 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 HIST2H3PS2Q5TEC6 136 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 DBX2Q6ZNG2 339 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CDHR3Q6ZTQ4 885 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 COX15Q7KZN9 410 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 C12orf57Q99622 126 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 QRSL1Q9H0R6 528 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 VDAC3Q9Y277 283 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CEPT1Q9Y6K0 416 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CXCL12P48061 93 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 EXT1Q16394 746 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 PLPP5Q8NEB5 264 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TWSG1Q9GZX9 223 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 BTAF1O14981 1849 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CHRM4P08173 479 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 AADACP22760 399 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 SLC1A3P43003 542 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 BPIFB3P59826 476 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 BTG1P62324 171 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF91Q05481 1191 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 LTBQ06643 244 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 CDK5R2Q13319 367 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 GPR18Q14330 331 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 PDLIM5Q96HC4 596 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 APOOQ9BUR5 198 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 SCPEP1Q9HB40 452 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 EMC7Q9NPA0 242 aa8.29□□□□□ -1.08
SHROOM4-203ENST00000460112 TUSC2O75896 110 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RAB6AP20340 208 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CNR2P34972 360 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 LCN6P62502 163 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OR6V1Q8N148 313 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FKRPQ9H9S5 495 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 NECAP2Q9NVZ3 263 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TXNL4BQ9NX01 149 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 MROH6A6NGR9 719 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 M0QZ24 198 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CHEK1O14757 476 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PLRG1O43660 514 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF623O75123 536 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CDKN2DP55273 166 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OTUD1Q5VV17 481 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FBXW5Q969U6 566 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 NOX3Q9HBY0 568 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PRSS38A1L453 326 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 A6NL46 340 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ACP2P11117 423 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PPP3CBP16298 524 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CSNK1DP48730 415 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ANKLE1Q8NAG6 615 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms