RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ZCCHC24Q8N2G6 241 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 C17orf78Q8N4C9 275 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 TEX29Q8N6K0 151 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 C1orf52Q8N6N3 182 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 CEP112Q8N8E3 955 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 FBXO36Q8NEA4 188 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 CLDND2Q8NHS1 167 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 B4GALNT2Q8NHY0 566 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 GRK7Q8WTQ7 553 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 WDR60Q8WVS4 1066 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 EXT2Q93063 718 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 LRRC58Q96CX6 371 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 R3HDM4Q96D70 268 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 ELP4Q96EB1 424 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 DAZAP1Q96EP5 407 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 GIMAP5Q96F15 307 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 MS4A14Q96JA4 679 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 GPR78Q96P69 363 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 CPNE1Q99829 537 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 THAP7Q9BT49 309 aaPredicted RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 SUCNR1Q9BXA5 334 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 C1QTNF6Q9BXI9 259 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 TSPY26PQ9H489 355 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 NOL11Q9H8H0 719 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 ANKZF1Q9H8Y5 726 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 NTN4Q9HB63 628 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 G6PC2Q9NQR9 355 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 FARSBQ9NSD9 589 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 VPS29Q9UBQ0 182 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 NDRG4Q9ULP0 352 aaKnown RBP3.16□□□□□ -1.9
RBM39-220ENST00000455343 ICAM5Q9UMF0 924 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 SLC12A4Q9UP95 1085 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 MOKQ9UQ07 419 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 GRIP1Q9Y3R0 1128 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
RBM39-220ENST00000455343 LOC105371242A0A075B767 164 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 IGHV1-18A0A0C4DH31 117 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GOLGA6L10A0A0M3HER8 536 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 TCRBV9S1A1TA0A576 114 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 FAM159BA6NKW6 160 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 CCT8L1PA6NM43 557 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 LYNX1G3V0Z9 82 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 STX16-NPEPL1H3BU86 382 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 H3BUI4 141 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 STX16O14662 325 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 WNT9BO14905 357 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 KCNK2O95069 426 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PNPP00491 289 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PDYNP01213 254 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 IGLV1-44P01699 117 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 IGHV3-9P01782 118 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 TFP02787 698 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 C2P06681 752 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GRPP07492 148 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 OR4A8P0C604 315 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 LYNX1P0DP58 116 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 HSD3B1P14060 373 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GFAPP14136 432 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 DDX5P17844 614 aaKnown RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 ADRA2CP18825 462 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PAX7P23759 505 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PRTN3P24158 256 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 CRABP2P29373 138 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GCH1P30793 250 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 SSTR1P30872 391 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GABRA3P34903 492 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 RFX3P48380 749 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 P2RX1P51575 399 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 SUMO3P55854 103 aaPredicted RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 ARL4CP56559 192 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 TMEM33P57088 247 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PRPS1P60891 318 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 H3F3AP84243 136 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 ZNF117Q03924 483 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 IFT88Q13099 833 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 SELENBP1Q13228 472 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 CCNIQ14094 377 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 MLC1Q15049 377 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 PPP1R7Q15435 360 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 ZNHIT3Q15649 155 aaPredicted RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 TOMM34Q15785 309 aaPredicted RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 PGS1Q32NB8 556 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 KLHL26Q53HC5 615 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 ELFN2Q5R3F8 820 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 FAHD2BQ6P2I3 314 aaPredicted RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 SHQ1Q6PI26 577 aaKnown RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 TMEM107Q6UX40 140 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 TMPPEQ6ZT21 453 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 SLC46A3Q7Z3Q1 461 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 MTERF4Q7Z6M4 381 aaKnown RBP3.15□□□□□ -1.91
RBM39-220ENST00000455343 CARM1Q86X55 608 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 ZNF100Q8IYN0 542 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 GATSQ8NAP1 163 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 ZNF527Q8NB42 609 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 NUP37Q8NFH4 326 aa3.15□□□□□ -1.91
RBM39-220ENST00000455343 OR4F6Q8NGB9 312 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms