RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ZP4Q12836 540 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 COX10Q12887 443 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TSPAN31Q12999 210 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PMS2P3Q13401 168 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 RIPK1Q13546 671 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 LAPTM4AQ15012 233 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 RCN1Q15293 331 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 POU4F3Q15319 338 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 EIF2S3LQ2VIR3 472 aaKnown RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TMEM211Q6ICI0 200 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 OR2A2Q6IF42 318 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 CD300LDQ6UXZ3 194 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SEM1Q6ZVN7 128 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 HIST3H2AQ7L7L0 130 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 OAFQ86UD1 273 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 LRRC17Q8N6Y2 441 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 AQP11Q8NBQ7 271 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 OR9Q2Q8NGE9 314 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GNPDA2Q8TDQ7 276 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 DNAJC9Q8WXX5 260 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ROBO4Q8WZ75 1007 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 HIST1H2ACQ93077 130 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ZFP3Q96NJ6 502 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 FEVQ99581 238 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GPA33Q99795 319 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PRRG4Q9BZD6 226 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 BCO1Q9HAY6 547 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 KLHL9Q9P2J3 617 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 OAZ3Q9UMX2 235 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 MEMO1Q9Y316 297 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 RRP15Q9Y3B9 282 aaKnown RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 IGHV3-15A0A0B4J1V0 119 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 MS4A18H0YCH9 400 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PLPP3O14495 311 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 MGRN1O60291 552 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PTP4A3O75365 173 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 CRHP06850 196 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GLI4P10075 376 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ANPEPP15144 967 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF23P17027 643 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 KLK2P20151 261 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 UQCRC1P31930 480 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PUDPQ08623 228 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 FHL1Q13642 323 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SLC17A1Q14916 467 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 MS4A18Q3C1V0 323 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ZBED5Q49AG3 693 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TMEM225Q6GV28 225 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 P4HA3Q7Z4N8 544 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 NANOGNBQ7Z5D8 188 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 PXKQ7Z7A4 578 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 CCDC103Q8IW40 242 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 HS3ST5Q8IZT8 346 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 C9orf106Q8NAJ2 232 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TAS2R5Q9NYW4 299 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 B3GAT1Q9P2W7 334 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SEC14L4Q9UDX3 406 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ING1Q9UK53 422 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SIGLEC7Q9Y286 467 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 DOCK7Q96N67 2140 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 MED12LQ86YW9 2145 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 UNC119BA6NIH7 251 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF724A8MTY0 619 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 KDM4EB2RXH2 506 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-204ENST00000452182 RAMP1O60894 148 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 SS18L1O75177 396 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-204ENST00000452182 TOXO94900 526 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 BAG2O95816 211 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 IL2RAP01589 272 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 ADORA3P0DMS8 318 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 UQCRFS1P47985 274 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 PRPS1P60891 318 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 RPL18Q07020 188 aaKnown RBP10.32□□□□□ -0.76
SCN9A-204ENST00000452182 RASGEF1BQ0VAM2 473 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 GUSBP1Q15486 140 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 TAF11Q15544 211 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 RIPPLY2Q5TAB7 128 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 FAHD1Q6P587 224 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 C3P1Q6ZMU1 363 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 RPRMLQ8N4K4 120 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 MARVELD2Q8N4S9 558 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 CLDN22Q8N7P3 220 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 OR13C2Q8NGS9 318 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 ABHD3Q8WU67 409 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 SDCCAG3Q96C92 435 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 OXGR1Q96P68 337 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 KLHL13Q9P2N7 655 aa10.32□□□□□ -0.76
SCN9A-204ENST00000452182 MAGED1Q9Y5V3 778 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-204ENST00000452182 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 NPIPB13A6NJU9 1138 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 NPIPB4C9JG80 1138 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 BLOC1S5-TXNDC5H3BN57 136 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 CCL21O00585 134 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms