RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 NUDT2P50583 147 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 SLC7A2P52569 658 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 LIPEQ05469 1076 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 CYBRD1Q53TN4 286 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 NIPAL3Q6P499 406 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 H1FNTQ75WM6 255 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-203ENST00000445704 LINGO2Q7L985 606 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 OR52N5Q8NH56 324 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 LILRB1Q8NHL6 650 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-203ENST00000445704 MUS81Q96NY9 551 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 OXGR1Q96P68 337 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 EPYCQ99645 322 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 AMBRA1Q9C0C7 1298 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 EFCAB1Q9HAE3 211 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 BAG5Q9UL15 447 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 B3GALT5Q9Y2C3 310 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 PRRC2AP48634 2157 aaKnown RBP16.5■□□□□ 0.23
HDAC4-203ENST00000445704 MS4A18H0YCH9 400 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 TRAF3IP2O43734 574 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-203ENST00000445704 ZNF43P17038 809 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 CLDN17P56750 224 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 SLC25A3Q00325 362 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 BSPH1Q075Z2 132 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 MS4A18Q3C1V0 323 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 HACD2Q6Y1H2 254 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 P2RY8Q86VZ1 359 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 POMGNT2Q8NAT1 580 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 ADPRHL1Q8NDY3 354 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 MUCL1Q96DR8 90 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 ALKBH3Q96Q83 286 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-203ENST00000445704 HOPXQ9BPY8 73 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-203ENST00000445704 PRSS27Q9BQR3 290 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 ZNF426Q9BUY5 554 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 NGBQ9NPG2 151 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 RNF115Q9Y4L5 304 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 SLC25A15Q9Y619 301 aa16.5■□□□□ 0.23
HDAC4-203ENST00000445704 CLOCKO15516 846 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 UPK3AO75631 287 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 ZNF432O94892 652 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 IFNA14P01570 189 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 HLA-DOBP13765 273 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 MPGP29372 298 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 OR1E2P47887 323 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 MFSD13AQ14CX5 517 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 DEF8Q6ZN54 512 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 C10orf53Q8N6V4 93 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 WDR31Q8NA23 367 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 NEUROG1Q92886 237 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 ASPNQ9BXN1 380 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 ESRP2Q9H6T0 727 aaKnown RBP16.49■□□□□ 0.23
HDAC4-203ENST00000445704 RCE1Q9Y256 329 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 AP3M1Q9Y2T2 418 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 CORINQ9Y5Q5 1042 aa16.49■□□□□ 0.23
HDAC4-203ENST00000445704 CELSR1Q9NYQ6 3014 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 LOC102725191A0A1B0GVB3 256 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 KPNA4O00629 521 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 HS3ST1O14792 307 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 CD3EP07766 207 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 NQO1P15559 274 aaKnown RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 CDH2P19022 906 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 PRDX6P30041 224 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 GSK3BP49841 420 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 IL1RL1Q01638 556 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 PMS2P3Q13401 168 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 C1DQ13901 141 aaKnown RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 OR7E24Q6IFN5 339 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 TTC33Q6PID6 262 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 C20orf204Q6ZNR8 217 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 WDFY1Q8IWB7 410 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 SCAIQ8N9R8 606 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 C1orf162Q8NEQ5 155 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 IGFBPL1Q8WX77 278 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 AKAP1Q92667 903 aaKnown RBP eCLIP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 CMTM5Q96DZ9 223 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 TPD52L3Q96J77 140 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 CCL19Q99731 98 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 ALG2Q9H553 416 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 SLC17A5Q9NRA2 495 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 BEX4Q9NWD9 120 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 MRPL39Q9NYK5 338 aaKnown RBP16.48■□□□□ 0.23
HDAC4-203ENST00000445704 F8P00451 2351 aa16.48■□□□□ 0.23
HDAC4-203ENST00000445704 PLPP3O14495 311 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 KRT33AO76009 404 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 MT-ATP6P00846 226 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 ZNF83P51522 516 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 PSME3P61289 254 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 SELENOWP63302 87 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 PIN1Q13526 163 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-203ENST00000445704 ZNF74Q16587 644 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 ADAM5Q6NVV9 412 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 NHLRC1Q6VVB1 395 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 PIGWQ7Z7B1 504 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 KRTAP1-3Q8IUG1 177 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 NKAIN4Q8IVV8 208 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 C1QTNF6Q9BXI9 259 aa16.47■□□□□ 0.23
HDAC4-203ENST00000445704 LINC00470Q9BZP3 86 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms