RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NFYAP23511 347 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF84P51523 738 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 HSD11B2P80365 405 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 UEVLDQ8IX04 471 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 SLC6A20Q9NP91 592 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 SLAMF7Q9NQ25 335 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GABARAPH6UMI1 98 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 CEACAM5P06731 702 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 TAS2R31P59538 309 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 MAT1AQ00266 395 aaKnown RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GALK2Q01415 458 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 CARD17Q5XLA6 110 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 ELP2Q6IA86 826 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 OR6F1Q8NGZ6 308 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GPATCH2Q9NW75 528 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 NPIPA2E9PIF3 369 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 NPIPA3F8WFD2 350 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 NARSO43776 548 aaKnown RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 CXADRP78310 365 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 SLC16A9Q7RTY1 509 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GTPBP8Q8N3Z3 284 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GALNT11Q8NCW6 608 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 CCNL2Q96S94 520 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 DKKL1Q9UK85 242 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 DCNP07585 359 aaKnown RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 GALP22466 123 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 SMAP2Q8WU79 429 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-206ENST00000445265 Q96M85 177 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 PPA2Q9H2U2 334 aa15.34■□□□□ 0.05
TCOF1-206ENST00000445265 ARID1BQ8NFD5 2236 aaPredicted RBP15.33■□□□□ 0.05
TCOF1-206ENST00000445265 TEX51A0A1B0GUA7 166 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 HERV-K104P61576 105 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 SGCBQ16585 318 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF547Q8IVP9 402 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 OR5H2Q8NGV7 314 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 ABI3Q9P2A4 366 aa15.33■□□□□ 0.05
TCOF1-206ENST00000445265 LIMS3P0CW19 117 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 LIMS4P0CW20 117 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 MAOBP27338 520 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 DIO1P49895 249 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 AGBL4Q5VU57 503 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF793Q6ZN11 406 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 MED25Q71SY5 747 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 TMPRSS9Q7Z410 1059 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 RDH10Q8IZV5 341 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 DIO2Q92813 273 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 RASD2Q96D21 266 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 MYEF2Q9P2K5 600 aaKnown RBP15.33■□□□□ 0.04
TCOF1-206ENST00000445265 KCNE3Q9Y6H6 103 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 BORCS7-ASMTA0A0B4J1R7 106 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 SELENOFO60613 162 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 CISD3P0C7P0 127 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 OC90Q02509 493 aaPredicted RBP15.33■□□□□ 0.04
TCOF1-206ENST00000445265 IRF3Q14653 427 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 NKAPLQ5M9Q1 402 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 FBLIM1Q8WUP2 373 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 RADILQ96JH8 1075 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 GLTPQ9NZD2 209 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 COQ3Q9NZJ6 369 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM269A0A1B0GVZ9 245 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 POM121BA6NF01 834 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF593O00488 134 aaPredicted RBP15.33■□□□□ 0.04
TCOF1-206ENST00000445265 RAB3AP20336 220 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 GPLD1P80108 840 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 VASNQ6EMK4 673 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 DNAAF1Q8NEP3 725 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 ZBTB8AQ96BR9 441 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 SMIM19Q96E16 107 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 SLC46A1Q96NT5 459 aa15.33■□□□□ 0.04
TCOF1-206ENST00000445265 H7C1C5 153 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 SLC2A5P22732 501 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 DLSTP36957 453 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 LCN6P62502 163 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CCDC71Q8IV32 467 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 OR5D14Q8NGL3 314 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ISG20L2Q9H9L3 353 aaKnown RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 SIRT3Q9NTG7 399 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 SLC17A4Q9Y2C5 497 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF780AO75290 641 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 HIST1H1CP16403 213 aaKnown RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF43P17038 809 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CEBPGP53567 150 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 DGCR2P98153 550 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 RNLSQ5VYX0 342 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 KIAA0895LQ68EN5 471 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 TSSK4Q6SA08 328 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 C5orf46Q6UWT4 87 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 PRSS45Q7RTY3 260 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 OR4Q3Q8NH05 313 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CUTCQ9NTM9 273 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 GALR3O60755 368 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 MPIG6BO95866 241 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 PDGFAP04085 211 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CALCBP10092 127 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 PPP3CBP16298 524 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ADH6P28332 368 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms