RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 TNK1Q13470 666 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 MELKQ14680 651 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 GSG1Q2KHT4 349 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 PLA1AQ53H76 456 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 LRRC69Q6ZNQ3 347 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 ZNF227Q86WZ6 799 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 NR4A3Q92570 626 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 KCTD12Q96CX2 325 aaKnown RBP10.71□□□□□ -0.7
HCFC1-203ENST00000444191 OR1F2PQ96R84 312 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 ZFYVE21Q9BQ24 234 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 ALG12Q9BV10 488 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 PTDSS2Q9BVG9 487 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 SDHAF2Q9NX18 166 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 ACTR10Q9NZ32 417 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 LRIT1Q9P2V4 623 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 SIGLEC7Q9Y286 467 aa10.71□□□□□ -0.7
HCFC1-203ENST00000444191 MRPS33Q9Y291 106 aaKnown RBP10.71□□□□□ -0.7
HCFC1-203ENST00000444191 CISD3P0C7P0 127 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ICAM2P13598 275 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 LTBQ06643 244 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 GRM7Q14831 915 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 TRAM1Q15629 374 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ARHGAP40Q5TG30 622 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 LIPNQ5VXI9 398 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ARIH2OSQ8N7S6 290 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 NAXEQ8NCW5 288 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ARHGDIGQ99819 225 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 SLC6A7Q99884 636 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 NRSN2Q9GZP1 204 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 DAPP1Q9UN19 280 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CAMK2AQ9UQM7 478 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 A0A087WV48 116 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 PRSS38A1L453 326 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 OR2AT4A6NND4 320 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CLDN4O14493 209 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CDC40O60508 579 aaKnown RBP eCLIP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 MTRF1O75570 445 aaKnown RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ZIC2O95409 532 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 TPOP07202 933 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 TMIGD3P0DMS9 266 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 SNRPNP63162 240 aaKnown RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 GPR18Q14330 331 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ADAMTSL4Q6UY14 1074 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 KRT77Q7Z794 578 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 BEST3Q8N1M1 668 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 MFSD9Q8NBP5 474 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 OR1E3Q8WZA6 343 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CPNE2Q96FN4 548 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 AICDAQ9GZX7 198 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ADGRL4Q9HBW9 690 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 TMEM74BQ9NUR3 256 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ABRACLQ9P1F3 81 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 F5H0A9 414 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 GPR75O95800 540 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ECDO95905 644 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 IFNA6P05013 189 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ZNF85Q03923 595 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 GPM6BQ13491 265 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 OR7E24Q6IFN5 339 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CD300LDQ6UXZ3 194 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ZNF765Q7L2R6 523 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 METTL21AQ8WXB1 218 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 FAM3CQ92520 227 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 WDR89Q96FK6 387 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CXorf58Q96LI9 332 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 LINC00615Q96LM1 132 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 SYT4Q9H2B2 425 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-203ENST00000444191 CKLFQ9UBR5 152 aa10.7□□□□□ -0.7
HCFC1-203ENST00000444191 DNAH14Q0VDD8 3507 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 SDK2Q58EX2 2172 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 KLF8O95600 359 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-203ENST00000444191 APBB3O95704 486 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 CEACAM5P06731 702 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 CT62P0C5K7 136 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 PUDPQ08623 228 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 CDK5R1Q15078 307 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 ALG10Q5BKT4 473 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 SHISA6Q6ZSJ9 500 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 VN1R4Q7Z5H5 301 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 PDZD9Q8IXQ8 264 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-203ENST00000444191 MCOLN1Q9GZU1 580 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 ISYNA1Q9NPH2 558 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 SLC39A1Q9NY26 324 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 HEBP2Q9Y5Z4 205 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 ASXL3Q9C0F0 2248 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 SNRNP200O75643 2136 aaKnown RBP10.69□□□□□ -0.7
HCFC1-203ENST00000444191 PYCARD-AS1I3L0S3 204 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 UGT2B7P16662 529 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 AKR1C4P17516 323 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 CXCR1P25024 350 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 PBX2P40425 430 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 ARFIP1P53367 373 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 PPP1CAP62136 330 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 SPOCK1Q08629 439 aa10.69□□□□□ -0.7
HCFC1-203ENST00000444191 CBFBQ13951 182 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms