RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZBTB8AQ96BR9 441 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 C10orf90Q96M02 699 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 OR11A1Q9GZK7 315 aa12.91□□□□□ -0.34
SMARCA4-204ENST00000444061 CLDN24A6NM45 220 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC1A7O00341 560 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 SYT7O43581 403 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 PLATP00750 562 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 DSCR4P56555 118 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 CLDN15P56746 228 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC36A2Q495M3 483 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 KDM8Q8N371 416 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 MS4A15Q8N5U1 240 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 IKZF5Q9H5V7 419 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 H7C1C5 153 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF701M0R085 212 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 FPR3P25089 353 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 LCN6P62502 163 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 NKAIN4Q8IVV8 208 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 RIMKLAQ8IXN7 391 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 LRRC18Q8N456 261 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 OR10A2Q9H208 303 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 DCSTAMPQ9H295 470 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 CROCCQ5TZA2 2017 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 A0A1W2PPW3 197 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 CDRT1O95170 752 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 FGF5P12034 268 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 PIGFQ07326 219 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF704Q6ZNC4 412 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 PRICKLE2Q7Z3G6 844 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 HAVCR2Q8TDQ0 301 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 GATA6Q92908 595 aa12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM71F1Q96KD3 344 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-204ENST00000444061 CLCA1A8K7I4 914 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 J3QRK9 145 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 M0R129 80 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 FOXS1O43638 330 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 HTR5AP47898 357 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 MEOX1P50221 254 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 AP3S2P59780 193 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 ADPRMQ3LIE5 342 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 SYT14P1Q58G82 188 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 MRM1Q6IN84 353 aaKnown RBP12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 LINGO2Q7L985 606 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 CHST11Q9NPF2 352 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 PCDHGB6Q9Y5F9 930 aa12.9□□□□□ -0.35
SMARCA4-204ENST00000444061 GDF9O60383 454 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 RLN1P04808 185 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 TBXA2RP21731 343 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 TNFSF4P23510 183 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 CHMP24386 653 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 NUBPLQ8TB37 319 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 TMEM163Q8TC26 289 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ARSGQ96EG1 525 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ZFP64Q9NPA5 681 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 GPR55Q9Y2T6 319 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ID4P47928 161 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF45Q02386 682 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 GXYLT1Q4G148 440 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 B3GNTL1Q67FW5 361 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ALG8Q9BVK2 526 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF350Q9GZX5 532 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 MMP27Q9H306 513 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 FABP12A6NFH5 140 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 IFNA7P01567 189 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 AZGP1P25311 298 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 DCAF10Q5QP82 559 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 C16orf47Q6ZP98 133 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 OR1J2Q8NGS2 313 aa12.89□□□□□ -0.35
SMARCA4-204ENST00000444061 PMS2P1A4D2B8 440 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 IGHV3-9P01782 118 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ACP1P24666 158 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 EBPQ15125 230 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF322Q6U7Q0 402 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 MIA3Q5JRA6 1907 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 OR5H15A6NDH6 313 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ACOT8O14734 319 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ERGP11308 486 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 MAP2K4P45985 399 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 EMDP50402 254 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 FOXF1Q12946 379 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 MAML2Q8IZL2 1156 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ZFP41Q8N8Y5 198 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 OR5AK2Q8NH90 309 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 KCNE3Q9Y6H6 103 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms