RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 GGTLC2Q14390 218 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 ZNF829Q3KNS6 432 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 ZNF791Q3KP31 576 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 CRTC2Q53ET0 693 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 LIPKQ5VXJ0 399 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 LYPD8Q6UX82 237 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 H1FNTQ75WM6 255 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 SHFQ7M4L6 423 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 PPP1R32Q7Z5V6 425 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 KCTD20Q7Z5Y7 419 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 ADGRG3Q86Y34 549 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 LRRC17Q8N6Y2 441 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 SUMF1Q8NBK3 374 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 OR2M3Q8NG83 312 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 DYNC2LI1Q8TCX1 351 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 SPRYD4Q8WW59 207 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 FER1L6-AS2Q96M78 137 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 Q96M85 177 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 DACH2Q96NX9 599 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 ARHGAP9Q9BRR9 750 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 NAA11Q9BSU3 229 aaPredicted RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 NUAK2Q9H093 628 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 OR51E2Q9H255 320 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 TXNIPQ9H3M7 391 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 CHST11Q9NPF2 352 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 MKI67P46013 3256 aaKnown RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 HSPB2A8KAH6 182 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 STMND1H3BQB6 276 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TLX3O43711 291 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 TNFSF15O95150 251 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 SPI1P17947 270 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ACVR1BP36896 505 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 CASP3P42574 277 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 RORCP51449 518 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 FOXL2P58012 376 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ZP4Q12836 540 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TOMM34Q15785 309 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 HSPB2Q16082 182 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 STPG1Q5TH74 334 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ABHD17BQ5VST6 288 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 SLC6A19Q695T7 634 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 FCRLBQ6BAA4 426 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 C16orf47Q6ZP98 133 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 PHC2Q8IXK0 858 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ARIH2OSQ8N7S6 290 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ADPRHL1Q8NDY3 354 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 OR1J4Q8NGS1 313 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 NDNFQ8TB73 568 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 GATAD2BQ8WXI9 593 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 THRSPQ92748 146 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 NXPE2Q96DL1 559 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ANGPTL4Q9BY76 406 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 P4HTMQ9NXG6 502 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ADAM30Q9UKF2 790 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 VDAC3Q9Y277 283 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 B3GALT5Q9Y2C3 310 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 HDGFL3Q9Y3E1 203 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 FKBP7Q9Y680 259 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TRDV1A0A1B0GX56 115 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ANKRD33BA6NCL7 494 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 LRRN3E7EW58 273 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 C11orf98E9PRG8 122 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 SNPHO15079 494 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 RGS9O75916 674 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 IL1AP01583 271 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 MYL9P24844 172 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 OR2B6P58173 313 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 SLC35A1P78382 337 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TLE3Q04726 772 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 OR7A5Q15622 319 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 INAQ16352 499 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 GLYR1Q49A26 553 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 OR2G6Q5TZ20 316 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 DESI1Q6ICB0 168 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 MZT2AQ6P582 158 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 C19orf48Q6RUI8 117 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 SLC16A9Q7RTY1 509 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 MARCH9Q86YJ5 346 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 KLBQ86Z14 1044 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 MS4A15Q8N5U1 240 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TMEM99Q8N816 258 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 FNDC8Q8TC99 324 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 RPL3LQ92901 407 aaKnown RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 PTP4A1Q93096 173 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 RASD2Q96D21 266 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ZMYND19Q96E35 227 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 TMEM41AQ96HV5 264 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 KLHL15Q96M94 604 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 MOGAT1Q96PD6 335 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 NMNAT3Q96T66 252 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 TBX5Q99593 518 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 ALG12Q9BV10 488 aa5.46□□□□□ -1.54
VPS50-205ENST00000441602 AKIRIN1Q9H9L7 192 aaPredicted RBP5.46□□□□□ -1.54
VPS50-205ENST00000441602 TEX51A0A1B0GUA7 166 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 NPIPB13A6NJU9 1138 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 TMEM200CA6NKL6 621 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 NPIPB4C9JG80 1138 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms