RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SAMD4AQ9UPU9 718 aaKnown RBP15.94■□□□□ 0.14
CPSF4-205ENST00000440514 B3GALT5Q9Y2C3 310 aa15.94■□□□□ 0.14
CPSF4-205ENST00000440514 CORINQ9Y5Q5 1042 aa15.94■□□□□ 0.14
CPSF4-205ENST00000440514 ENO4A6NNW6 628 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 FFAR1O14842 300 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 PIP5K1CO60331 668 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 PDE5AO76074 875 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 MT-ATP6P00846 226 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 THBDP07204 575 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 THRBP10828 461 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 IGHV1-2P23083 117 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 IL32P24001 234 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 FOXG1P55316 489 aaPredicted RBP15.93■□□□□ 0.14
CPSF4-205ENST00000440514 PMS2P3Q13401 168 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 SFRP5Q5T4F7 317 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 TSPO2Q5TGU0 170 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 FBXW9Q5XUX1 488 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 LRRC17Q8N6Y2 441 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 SCAIQ8N9R8 606 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 TMEM239Q8WW34 195 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 KISS1RQ969F8 398 aaPredicted RBP15.93■□□□□ 0.14
CPSF4-205ENST00000440514 S100PBPQ96BU1 408 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 NSMCE2Q96MF7 247 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 SLC19A3Q9BZV2 496 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 SLC7A10Q9NS82 523 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 MAN2C1Q9NTJ4 1040 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 MRPL39Q9NYK5 338 aaKnown RBP15.93■□□□□ 0.14
CPSF4-205ENST00000440514 GPR52Q9Y2T5 361 aa15.93■□□□□ 0.14
CPSF4-205ENST00000440514 MS4A18H0YCH9 400 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 hCG_2039718K7EN88 272 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 TRAF3IP2O43734 574 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 CTAG2O75638 210 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ATP5HO75947 161 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 STAMBPO95630 424 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ZNF43P17038 809 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 COX5AP20674 150 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ATP6V1B2P21281 511 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 RBM34P42696 430 aaKnown RBP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 SELENOPP49908 381 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 CLDN17P56750 224 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 LSM11P83369 360 aaKnown RBP eCLIP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 LGALS3BPQ08380 585 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ST3GAL3Q11203 375 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 FAPQ12884 760 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ITGADQ13349 1161 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 DAZAP2Q15038 168 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 P2RY6Q15077 328 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 MS4A18Q3C1V0 323 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 NIPAL3Q6P499 406 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 BHLHA15Q7RTS1 189 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 SLC46A3Q7Z3Q1 461 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 OR5J2Q8NH18 312 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 LURAP1Q96LR2 239 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 OXGR1Q96P68 337 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 FNDC11Q9BVV2 318 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 MUC13Q9H3R2 512 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 C20orf141Q9NUB4 165 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 PARPBPQ9NWS1 579 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 TAS2R1Q9NYW7 299 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 MALT1Q9UDY8 824 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 PRPF19Q9UMS4 504 aaKnown RBP15.92■□□□□ 0.14
CPSF4-205ENST00000440514 ENPP4Q9Y6X5 453 aa15.92■□□□□ 0.14
CPSF4-205ENST00000440514 HTR3EA5X5Y0 456 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 PLPP3O14495 311 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 SIAH2O43255 324 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 RAD51DO75771 328 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 SERPINI2O75830 405 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 PRSS23O95084 383 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 CNOT4O95628 575 aaKnown RBP15.91■□□□□ 0.14
CPSF4-205ENST00000440514 MT-ND1P03886 318 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 UMPSP11172 480 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 HLA-DOBP13765 273 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 DNAJA1P31689 397 aaKnown RBP15.91■□□□□ 0.14
CPSF4-205ENST00000440514 VLDLRP98155 873 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 POU3F1Q03052 451 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-205ENST00000440514 PUDPQ08623 228 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 C1DQ13901 141 aaKnown RBP15.91■□□□□ 0.14
CPSF4-205ENST00000440514 C9orf135Q5VTT2 229 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 CYP2R1Q6VVX0 501 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 STEAP2Q8NFT2 490 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 CLPTM1LQ96KA5 538 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 SLCO5A1Q9H2Y9 848 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 FKRPQ9H9S5 495 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 NANSQ9NR45 359 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 RASSF1Q9NS23 344 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 ASB6Q9NWX5 421 aa15.91■□□□□ 0.14
CPSF4-205ENST00000440514 ITPR2Q14571 2701 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 FAM221AA4D161 298 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 C11orf98E9PRG8 122 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 CASKO14936 926 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 OR7A10O76100 309 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 DIRAS1O95057 198 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 SEMG1P04279 462 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 ITGA5P08648 1049 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 ADORA3P0DMS8 318 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 PPP3CBP16298 524 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 CRYGSP22914 178 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 TRAM2Q15035 370 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
CPSF4-205ENST00000440514 FBXW10Q5XX13 1052 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms