RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GPANK1O95872 356 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 MAKP20794 623 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 GSTM3P21266 225 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 PEBP1P30086 187 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 LIMS1P48059 325 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 HMGA2P52926 109 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 DLX2Q07687 328 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 FGL1Q08830 312 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF273Q14593 569 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 GAB4Q2WGN9 574 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC36A2Q495M3 483 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM35AQ53FP2 167 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 CLLU1Q5K131 121 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 PAQR8Q8TEZ7 354 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM3CQ92520 227 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 WDR34Q96EX3 536 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 SCMH1Q96GD3 660 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 USB1Q9BQ65 265 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 LIN7BQ9HAP6 207 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 HRASLSQ9HDD0 168 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 POMT2Q9UKY4 750 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ATXN7L1Q9ULK2 861 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 A0A1W2PRQ8 180 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 DUXAA6NLW8 204 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 METTL12A8MUP2 240 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 SOX1O00570 391 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ITGA3P26006 1051 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ITPKBP27987 946 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 OMPP47874 163 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 KCNJ3P48549 501 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 LIMK1P53667 647 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 AMZ1Q400G9 498 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR10K2Q6IF99 312 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 GSG1LQ6UXU4 331 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF836Q6ZNA1 936 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMUB2Q71RG4 321 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 CD163Q86VB7 1156 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 PRR22Q8IZ63 422 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR52H1Q8NGJ2 320 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 HSPA12BQ96MM6 686 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 TNFRSF13CQ96RJ3 184 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 PINK1Q9BXM7 581 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLITRK2Q9H156 845 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 ACTR10Q9NZ32 417 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 MED11Q9P086 117 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 MOKQ9UQ07 419 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 YBX2Q9Y2T7 364 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
CDC42SE1-202ENST00000439374 CACNA1DQ01668 2161 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 TRAV18A0A075B6X5 111 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 MED19A0JLT2 244 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 B3GALNT1O75752 331 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 EPPINO95925 133 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 NMBP08949 121 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR8G3PP0DMU2 310 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 UGT2B7P16662 529 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 PVALBP20472 110 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 EIF2B5Q13144 721 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 CD276Q5ZPR3 534 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 VN1R4Q7Z5H5 301 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZAR1Q86SH2 424 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 CSNK1A1LQ8N752 337 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 ADAMTS14Q8WXS8 1223 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 OSTF1Q92882 214 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 WDR92Q96MX6 357 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 NT5DC2Q9H857 520 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF443Q9Y2A4 671 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 NOP16Q9Y3C1 178 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 PCDHGA5Q9Y5G8 931 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 F5H0A9 414 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 SURF4O15260 269 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM157BP0CG42 384 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 CFL1P23528 166 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 VASPP50552 380 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 HLXQ14774 488 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 TGIF1Q15583 401 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 GLT8D1Q68CQ7 371 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 MFSD12Q6NUT3 480 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 FBXO42Q6P3S6 717 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 SHISA6Q6ZSJ9 500 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 RHOUQ7L0Q8 258 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 FCAMRQ8WWV6 532 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 ACOT11Q8WXI4 607 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 TEX101Q9BY14 249 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 MCOLN1Q9GZU1 580 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 C12orf10Q9HB07 376 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 PHF11Q9UIL8 331 aa9.13□□□□□ -0.95
CDC42SE1-202ENST00000439374 RAB19A4D1S5 217 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 UNC119BA6NIH7 251 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 KRT33AO76009 404 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 BMP8BP34820 402 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CCR9P51686 369 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 C21orf58P58505 322 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SKP1P63208 163 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR1Q1Q15612 314 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms