RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 C14orf119Q9NWQ9 140 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 GRHPRQ9UBQ7 328 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ADAM18Q9Y3Q7 739 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 UNC13CQ8NB66 2214 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 IGHV5-10-1A0A0J9YXX1 117 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 OR6C68A6NDL8 312 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 OR6C70A6NIJ9 312 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 AGRPO00253 132 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 GATBO75879 557 aaKnown RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 ONECUT2O95948 504 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 MT-ATP6P00846 226 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 HEXBP07686 556 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ABCD3P28288 659 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 UQCRC1P31930 480 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 PYCR1P32322 319 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 P2RX1P51575 399 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SIRPAP78324 504 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 EGR4Q05215 589 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SLC3A1Q07837 685 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 MRPL28Q13084 256 aaKnown RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 RIN1Q13671 783 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 CLPPQ16740 277 aaPredicted RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 PYDC2Q56P42 97 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 HBMQ6B0K9 141 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 CEACAM19Q7Z692 300 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 MARCH3Q86UD3 253 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 BPHLQ86WA6 291 aaPredicted RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 MOSPD2Q8NHP6 518 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 STT3BQ8TCJ2 826 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 METTL21AQ8WXB1 218 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 TXNDC15Q96J42 360 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 DCLRE1CQ96SD1 692 aaKnown RBP11.67□□□□□ -0.54
DDX56-204ENST00000431640 MNTQ99583 582 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 SOSTQ9BQB4 213 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 TIGARQ9NQ88 270 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 KLHL1Q9NR64 748 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
DDX56-204ENST00000431640 TRAV36DV7A0A075B6V5 113 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 TRAV1-2A0A0B4J238 106 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 CDC14CA4D256 554 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 E9PI62 339 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 BOLA2-SMG1P6H3BVE0 249 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 GPRIN2O60269 458 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 FADS1O60427 444 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 SLC25A12O75746 678 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 SC5DO75845 299 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 ARL6IP5O75915 188 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 TACSTD2P09758 323 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 HTR3AP46098 478 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 POLR2HP52434 150 aaKnown RBP11.66□□□□□ -0.54
DDX56-204ENST00000431640 CAV3P56539 151 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 RNF4P78317 190 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 DCDP81605 110 aaKnown RBP11.66□□□□□ -0.54
DDX56-204ENST00000431640 ASAH1Q13510 395 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 BAK1Q16611 211 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 ACSM3Q53FZ2 586 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 SLC6A19Q695T7 634 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 MAMDC2Q7Z304 686 aaPredicted RBP11.66□□□□□ -0.54
DDX56-204ENST00000431640 FAM122BQ7Z309 247 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 PXKQ7Z7A4 578 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 PRSS58Q8IYP2 241 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 THAP4Q8WY91 577 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 GHSRQ92847 366 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 TTYH2Q9BSA4 534 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 NRSN2Q9GZP1 204 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 NPAP1Q9NZP6 1156 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 ST6GALNAC2Q9UJ37 374 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 NPFFR2Q9Y5X5 522 aa11.66□□□□□ -0.54
DDX56-204ENST00000431640 HEATR5AQ86XA9 2040 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 HPGDSO60760 199 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 NUDT14O95848 222 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 RENP00797 406 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 TFP02787 698 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 GP1BAP07359 652 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 CYC1P08574 325 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 NAGAP17050 411 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 SHC1P29353 583 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 CDKN2AP42771 156 aaKnown RBP11.65□□□□□ -0.54
DDX56-204ENST00000431640 CENPAP49450 140 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 DUSP3P51452 185 aaPredicted RBP11.65□□□□□ -0.54
DDX56-204ENST00000431640 EFNA3P52797 238 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 SLC26A5P58743 744 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 E2F1Q01094 437 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 LTBQ06643 244 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 NKAIN1Q4KMZ8 207 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 ZMAT1Q5H9K5 638 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 CNIH2Q6PI25 160 aa11.65□□□□□ -0.54
DDX56-204ENST00000431640 COX15Q7KZN9 410 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms