RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 COL24A1Q17RW2 1714 aa2.28□□□□□ -2.05
HMGB1P27-201ENST00000431429 LMO7Q8WWI1 1683 aa2.28□□□□□ -2.05
HMGB1P27-201ENST00000431429 TNRC6CQ9HCJ0 1690 aaKnown RBP2.28□□□□□ -2.05
HMGB1P27-201ENST00000431429 CROCCQ5TZA2 2017 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 INSRP06213 1382 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 KTN1Q86UP2 1357 aaKnown RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CENPJQ9HC77 1338 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 SBF2Q86WG5 1849 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 IGKV1D-8A0A087WSZ0 117 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 KLF18A0A0U1RQI7 1052 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 A0A1B0GUS0 222 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 EPOPA6NHQ4 379 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 PCP4L1A6NKN8 68 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 DCTN6O00399 190 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 HSD17B6O14756 317 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 UPK3AO75631 287 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 SERPINA3P01011 423 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 GAPDHP04406 335 aaKnown RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CRYGBP07316 175 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 HSMCR30P0CW71 290 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 MX1P20591 662 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 VDAC1P21796 283 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCR1P32246 355 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 UGT1A3P35503 534 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 BTDP43251 543 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 PLK1P53350 603 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 RIPK4P57078 832 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 ACTR3P61158 418 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CDK16Q00536 496 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CHRNB3Q05901 458 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF763Q0D2J5 394 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 GK3PQ14409 553 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 TRIM16LQ309B1 348 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 PAGE2BQ5JRK9 111 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 C9orf129Q5T035 196 aaKnown RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR2A2Q6IF42 318 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 C11orf71Q6IPW1 123 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 DNM1P46Q6ZS02 220 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 RUFY3Q7L099 469 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC50Q8IVM0 306 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 DEFB123Q8N688 67 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 ALLCQ8N6M5 410 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR56B2PQ8NGI1 322 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR1L4Q8NGR5 311 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 RHOXF1Q8NHV9 184 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 DCPSQ96C86 337 aaKnown RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 C12orf42Q96LP6 360 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 COPS8Q99627 209 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CHRDL1Q9BU40 450 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 TRIM62Q9BVG3 475 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 ANKRD19PQ9H560 264 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZFP14Q9HCL3 533 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 RPS10P5Q9NQ39 176 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 TNFRSF19Q9NS68 423 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 NMRK1Q9NWW6 199 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 KLHL21Q9UJP4 597 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 COL18A1P39060 1754 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 TRPM3Q9HCF6 1732 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 NHSQ6T4R5 1651 aa2.27□□□□□ -2.05
HMGB1P27-201ENST00000431429 CD163L1Q9NR16 1453 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIF1BO60333 1816 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 TNRC18O15417 2968 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 QSER1Q2KHR3 1735 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SH3TC1Q8TE82 1336 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 USP42Q9H9J4 1324 aaKnown RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 CLSPNQ9HAW4 1339 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SMIM28A0A1B0GU29 152 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ARHGEF35A5YM69 484 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIF2AO00139 706 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 HMMRO75330 724 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 STAMBPO95630 424 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 LGI1O95970 557 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 NDUFB10O96000 172 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 TIMP1P01033 207 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 HSPB1P04792 205 aaKnown RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC2A3P11169 496 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ETS2P15036 469 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 EPS15P42566 896 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 BEX3Q00994 111 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ASPHQ12797 758 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 DUSP7Q16829 419 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 DGUOKQ16854 277 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 KLHL38Q2WGJ6 581 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ENPP6Q6UWR7 440 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 TFAP2EQ6VUC0 442 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC25A48Q6ZT89 311 aaKnown RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ACOT7LQ6ZUV0 252 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 MOB1BQ7L9L4 216 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC22A9Q8IVM8 553 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 CEND1Q8N111 149 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 CADM2Q8N3J6 435 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR2L3Q8NG85 312 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 FAM110BQ8TC76 370 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 SETD7Q8WTS6 366 aaKnown RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 C7orf33Q8WU49 177 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 TPD52L3Q96J77 140 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 RPRD1AQ96P16 312 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 RNF2Q99496 336 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms