RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 ACBD4Q8NC06 268 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-204ENST00000429629 OR9K2Q8NGE7 335 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 OR2T29Q8NH02 315 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 ZNF417Q8TAU3 575 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-204ENST00000429629 ZNF587Q96SQ5 575 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-204ENST00000429629 ARMC1Q9NVT9 282 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 B3GAT1Q9P2W7 334 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 NOX1Q9Y5S8 564 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 FLVCR1Q9Y5Y0 555 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 V9GYQ6 96 aa13.29□□□□□ -0.28
GARNL3-204ENST00000429629 SH3PXD2BA1X283 911 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 NPIPB13A6NJU9 1138 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 NPIPB4C9JG80 1138 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 RAMP1O60894 148 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 OR6A2O95222 327 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 RNF224P0DH78 156 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 ZNF43P17038 809 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 KLK2P20151 261 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 FUT4P22083 530 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 RRM2P31350 389 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 OR3A2P47893 321 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 ACTR3P61158 418 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 PUDPQ08623 228 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 RNASE6Q93091 150 aaKnown RBP13.28□□□□□ -0.28
GARNL3-204ENST00000429629 ALPK1Q96QP1 1244 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 USB1Q9BQ65 265 aaKnown RBP13.28□□□□□ -0.28
GARNL3-204ENST00000429629 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 C20orf141Q9NUB4 165 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 C6orf203Q9P0P8 240 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-204ENST00000429629 RCE1Q9Y256 329 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 NOSIPQ9Y314 301 aaKnown RBP13.28□□□□□ -0.28
GARNL3-204ENST00000429629 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
GARNL3-204ENST00000429629 TRBV4-1A0A0J9YWV2 114 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 MRPL33O75394 65 aaKnown RBP13.27□□□□□ -0.29
GARNL3-204ENST00000429629 DIRAS1O95057 198 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 IFI30P13284 250 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
GARNL3-204ENST00000429629 OMPP47874 163 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 RPS4XP62701 263 aaKnown RBP13.27□□□□□ -0.29
GARNL3-204ENST00000429629 SORDQ00796 357 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 SPIBQ01892 262 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 CDSNQ15517 529 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 ZSCAN26Q16670 478 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 C1QTNF12Q5T7M4 302 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 VWA1Q6PCB0 445 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 KIF18BQ86Y91 864 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 PFN4Q8NHR9 129 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 HDHD5Q9BXW7 423 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 UCK2Q9BZX2 261 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 OR10A4Q9H209 315 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 TAS2R5Q9NYW4 299 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 DNAJB9Q9UBS3 223 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 AURKCQ9UQB9 309 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 MYO7BQ6PIF6 2116 aa13.27□□□□□ -0.29
GARNL3-204ENST00000429629 LRRN3E7EW58 273 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 TNFRSF11BO00300 401 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 KLF4O43474 513 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 FKBP6O75344 327 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF432O94892 652 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 CST1P01037 141 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 UQCRC1P31930 480 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 PRPS1P60891 318 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 NCOA6Q14686 2063 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 P2RY6Q15077 328 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 SEC23BQ15437 767 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 TAF11Q15544 211 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 FGD3Q5JSP0 725 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 C1orf94Q6P1W5 598 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF474Q6S9Z5 364 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 TBPL2Q6SJ96 375 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 TFAP2EQ6VUC0 442 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 Q6ZT83 130 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 NUFIP2Q7Z417 695 aaKnown RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 GPAT4Q86UL3 456 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 LRRC17Q8N6Y2 441 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF610Q8N9Z0 462 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 DNAJA3Q96EY1 480 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 RSRC1Q96IZ7 334 aaKnown RBP13.26□□□□□ -0.29
GARNL3-204ENST00000429629 LRR1Q96L50 414 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 SPOCK3Q9BQ16 436 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 ENKD1Q9H0I2 346 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 REEP1Q9H902 201 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms