RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 M0R082 166 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 EIF1AYO14602 144 aaKnown RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 EDNRAP25101 427 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 BMXP51813 675 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ARHGDIAP52565 204 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 RAD23AP54725 363 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CDK5R2Q13319 367 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 MELKQ14680 651 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ANKRD13BQ86YJ7 626 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CISD2Q8N5K1 135 aaKnown RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 TMEM99Q8N816 258 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 BBS1Q8NFJ9 593 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF417Q8TAU3 575 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ROBO4Q8WZ75 1007 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF587Q96SQ5 575 aaPredicted RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 SRXN1Q9BYN0 137 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 MCCC2Q9HCC0 563 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ENPP5Q9UJA9 477 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 LHX6Q9UPM6 363 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 KMT2BQ9UMN6 2715 aaPredicted RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 A0A0J9YW62 118 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAAHO00519 579 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 CEACAM4O75871 244 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 CLPXO76031 633 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 PPP1R3DO95685 299 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ACVR2AP27037 513 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 FMO3P31513 532 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ERVK-25P63136 954 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 MVKQ03426 396 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 RUNX1T1Q06455 604 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 AQP6Q13520 282 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SYT14P1Q58G82 188 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 C1orf140Q5VVS0 124 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 C1orf94Q6P1W5 598 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ASB18Q6ZVZ8 466 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 GRINAQ7Z429 371 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 RPRMLQ8N4K4 120 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNRF4Q8WWF5 429 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 RASD2Q96D21 266 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SMAD5Q99717 465 aaKnown RBP8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 BCL7BQ9BQE9 202 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 FUNDC2Q9BWH2 189 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 RERGLQ9H628 205 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 EXOSC3Q9NQT5 275 aaKnown RBP8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 MED29Q9NX70 200 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SPRR3Q9UBC9 169 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SH3BGRL2Q9UJC5 107 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 B3GNT3Q9Y2A9 372 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 HSPE1-MOB4S4R3N1 261 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 BCKDKO14874 412 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 KLF4O43474 513 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 XPNPEP2O43895 674 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 CBR3O75828 277 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 CD46P15529 392 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 GRPRP30550 384 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 AGFG1P52594 562 aaKnown RBP8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 TMPRSS3P57727 454 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 KEAP1Q14145 624 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SHFQ7M4L6 423 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 Q8NA96 180 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 PIGXQ8TBF5 258 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 TXNDC15Q96J42 360 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 COX4I2Q96KJ9 171 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SFXN2Q96NB2 322 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAM173AQ9BQD7 235 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ARHGAP9Q9BRR9 750 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR52D1Q9H346 318 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 PTGES2Q9H7Z7 377 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 NANSQ9NR45 359 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 TVP23BQ9NYZ1 205 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ABI3Q9P2A4 366 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SIGLEC7Q9Y286 467 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 ORC6Q9Y5N6 252 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 SNX5Q9Y5X3 404 aa8.55□□□□□ -1.04
HMGCLL1-206ENST00000428842 EFCAB9A8MZ26 197 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPIPA2E9PIF3 369 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 E9PQ18 207 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPIPA3F8WFD2 350 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 PRKYO43930 277 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 IGHV3-9P01782 118 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ADRA2AP08913 450 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NOS3P29474 1203 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NTF4P34130 210 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 RPS27P42677 84 aaKnown RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 CXCR4P61073 352 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 GINS1Q14691 196 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SPCS2Q15005 226 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF74Q16587 644 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 CTF1Q16619 201 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DCDC5Q6ZRR9 648 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SETD9Q8NE22 299 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 FANK1Q8TC84 345 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 CHPT1Q8WUD6 406 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAR1Q8WVX9 515 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms